Long-term waterlogging as factor contributing to hypoxia stress tolerance enhancement in cucumber: Comparative transcriptome analysis of waterlogging sensitive …

K Kęska, MW Szcześniak, I Makałowska, M Czernicka - Genes, 2021 - mdpi.com
Waterlogging (WL), excess water in the soil, is a phenomenon often occurring during plant
cultivation causing low oxygen levels (hypoxia) in the soil. The aim of this study was to …

Identification and characterization of Bacillus tequilensis GYUN-300: an antagonistic bacterium against red pepper anthracnose caused by Colletotrichum acutatum in …

HT Kwon, Y Lee, J Kim, K Balaraju, HT Kim… - Frontiers in …, 2022 - frontiersin.org
Anthracnose is a fungal disease caused by Colletotrichum species and has detrimental
effects on many crops, including red pepper. This study used Bacillus tequilensis GYUN-300 …

The antibiotic action of methylarsenite is an emergent property of microbial communities

J Chen, M Yoshinaga, BP Rosen - Molecular microbiology, 2019 - Wiley Online Library
Arsenic is the most ubiquitous environmental toxin. Here, we demonstrate that bacteria have
evolved the ability to use arsenic to gain a competitive advantage over other bacteria at least …

Optimizing and benchmarking de novo transcriptome sequencing: from library preparation to assembly evaluation

Y Hara, K Tatsumi, M Yoshida, E Kajikawa, H Kiyonari… - BMC genomics, 2015 - Springer
Background RNA-seq enables gene expression profiling in selected spatiotemporal
windows and yields massive sequence information with relatively low cost and time …

Comparative analysis of mitochondrial N-termini from mouse, human, and yeast

SE Calvo, O Julien, KR Clauser, H Shen… - Molecular & Cellular …, 2017 - ASBMB
The majority of mitochondrial proteins are encoded in the nuclear genome, translated in the
cytoplasm, and directed to the mitochondria by an N-terminal presequence that is cleaved …

Additives affect the distribution of metabolic profile, microbial communities and antibiotic resistance genes in high-moisture sweet corn kernel silage

Z Wu, Y Luo, J Bao, Y Luo, Z Yu - Bioresource Technology, 2020 - Elsevier
This work investigated the effects of chemical additive vanillin (V), homofermentative
Lactobacillus plantarum (LP), and heterofermentative Lactobacillus brevis (LB) on the …

Insights from genomes of representatives of the human gut commensal Bifidobacterium bifidum

S Duranti, C Milani, GA Lugli, F Turroni… - Environmental …, 2015 - Wiley Online Library
Bifidobacteria are bacterial gut commensals of mammals, birds and social insects that are
perceived to influence the metabolism/physiology of their host. In this context, members of …

Effects of spaceflight on the composition and function of the human gut microbiota

Z Liu, G Luo, R Du, W Sun, J Li, H Lan, P Chen… - Gut …, 2020 - Taylor & Francis
Interaction between humans and the gut microbiota is important for human physiology. Here,
the gut microbiota was analyzed via metagenomic sequencing, and the fluctuations in the …

The lungfish transcriptome: a glimpse into molecular evolution events at the transition from water to land

MA Biscotti, M Gerdol, A Canapa, M Forconi, E Olmo… - Scientific reports, 2016 - nature.com
Lungfish and coelacanths are the only living sarcopterygian fish. The phylogenetic
relationship of lungfish to the last common ancestor of tetrapods and their close …

Intestinal microbiota and functional characteristics of black soldier fly larvae (Hermetia illucens)

Y Zhineng, M Ying, T Bingjie, Z Rouxian, Z Qiang - Annals of Microbiology, 2021 - Springer
Purpose Black soldier fly transforms organic waste into insect protein and fat, which makes it
valuable for ecological utilization. This process is associated with the intestinal microbiota …