The emerging roles of human tissue kallikreins in cancer

CA Borgoño, EP Diamandis - Nature Reviews Cancer, 2004 - nature.com
Human tissue kallikreins (hKs), which are encoded by the largest contiguous cluster of
protease genes in the human genome, are secreted serine proteases with diverse …

Microarray technology: beyond transcript profiling and genotype analysis

JD Hoheisel - Nature reviews genetics, 2006 - nature.com
Understanding complex functional mechanisms requires the global and parallel analysis of
different cellular processes. DNA microarrays have become synonymous with this kind of …

The unfoldomics decade: an update on intrinsically disordered proteins

AK Dunker, CJ Oldfield, J Meng, P Romero, JY Yang… - BMC genomics, 2008 - Springer
Background Our first predictor of protein disorder was published just over a decade ago in
the Proceedings of the IEEE International Conference on Neural Networks (Romero P …

Single-cell alternative splicing analysis with expedition reveals splicing dynamics during neuron differentiation

Y Song, OB Botvinnik, MT Lovci, B Kakaradov, P Liu… - Molecular cell, 2017 - cell.com
Alternative splicing (AS) generates isoform diversity for cellular identity and homeostasis in
multicellular life. Although AS variation has been observed among single cells, little is …

Mutations in ribonucleic acid binding protein gene cause familial dilated cardiomyopathy

KM Brauch, ML Karst, KJ Herron, M de Andrade… - Journal of the American …, 2009 - jacc.org
Objectives: We sought to identify a novel gene for dilated cardiomyopathy (DCM).
Background: DCM is a heritable, genetically heterogeneous disorder that remains idiopathic …

Alternative splicing of pre-messenger RNAs in plants in the genomic era

ASN Reddy - Annu. Rev. Plant Biol., 2007 - annualreviews.org
Primary transcripts (precursor-mRNAs) with introns can undergo alternative splicing to
produce multiple transcripts from a single gene by differential use of splice sites, thereby …

RNA G-quadruplex secondary structure promotes alternative splicing via the RNA-binding protein hnRNPF

H Huang, J Zhang, SE Harvey, X Hu… - Genes & …, 2017 - genesdev.cshlp.org
It is generally thought that splicing factors regulate alternative splicing through binding to
RNA consensus sequences. In addition to these linear motifs, RNA secondary structure is …

Alternative splicing in disease and therapy

MA Garcia-Blanco, AP Baraniak, EL Lasda - Nature biotechnology, 2004 - nature.com
Alternative splicing is the major source of proteome diversity in humans and thus is highly
relevant to disease and therapy. For example, recent work suggests that the long-sought …

Alternative splicing in colon, bladder, and prostate cancer identified by exon array analysis

K Thorsen, KD Sørensen, AS Brems-Eskildsen… - Molecular & Cellular …, 2008 - ASBMB
Alternative splicing enhances proteome diversity and modulates cancer-associated proteins.
To identify tissue-and tumor-specific alternative splicing, we used the GeneChip Human …

Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing

RD Morin, M Bainbridge, A Fejes, M Hirst… - …, 2008 - Taylor & Francis
Sequence-based methods for transcriptome characterization have typically relied on
generation of either serial analysis of gene expression tags or expressed sequence tags …