Microsystem advances through integration with artificial intelligence

HF Tsai, S Podder, PY Chen - Micromachines, 2023 - mdpi.com
Microfluidics is a rapidly growing discipline that involves studying and manipulating fluids at
reduced length scale and volume, typically on the scale of micro-or nanoliters. Under the …

The development of plant genome sequencing technology and its conservation and application in endangered gymnosperms

K Hong, Y Radian, T Manda, H Xu, Y Luo - Plants, 2023 - mdpi.com
Genome sequencing is widely recognized as a fundamental pillar in genetic research and
legal studies of biological phenomena, providing essential insights for genetic investigations …

A review on deep learning applications in highly multiplexed tissue imaging data analysis

M Zidane, A Makky, M Bruhns, A Rochwarger… - Frontiers in …, 2023 - frontiersin.org
Since its introduction into the field of oncology, deep learning (DL) has impacted clinical
discoveries and biomarker predictions. DL-driven discoveries and predictions in oncology …

Spatial transcriptomic analysis of the mouse brain following chronic social defeat stress

T Wang, Z Song, X Zhao, Y Wu, L Wu… - …, 2023 - Wiley Online Library
Depression is a highly prevalent and disabling mental disorder, involving numerous genetic
changes that are associated with abnormal functions in multiple regions of the brain …

Deep learning in spatially resolved transcriptfomics: a comprehensive technical view

R Zahedi, R Ghamsari, A Argha… - Briefings in …, 2024 - academic.oup.com
Spatially resolved transcriptomics (SRT) is a pioneering method for simultaneously studying
morphological contexts and gene expression at single-cell precision. Data emerging from …

Inferring cell–cell communications from spatially resolved transcriptomics data using a Bayesian Tweedie model

D Wu, JT Gaskins, M Sekula, S Datta - Genes, 2023 - mdpi.com
Cellular communication through biochemical signaling is fundamental to every biological
activity. Investigating cell signaling diffusions across cell types can further help understand …

[HTML][HTML] Boosting single-cell rna sequencing analysis with simple neural attention

OA Davalos, AA Heydari, EJ Fertig, SS Sindi, KK Hoyer - bioRxiv, 2023 - ncbi.nlm.nih.gov
A limitation of current deep learning (DL) approaches for single-cell RNA sequencing
(scRNAseq) analysis is the lack of interpretability. Moreover, existing pipelines are designed …

Comparative Analysis of Deep Learning Architectures for DNA Sequence Classification: Performance Evaluation and Model Insights

G Airlangga - Journal of Computer System and Informatics …, 2024 - ejurnal.seminar-id.com
The classification of DNA sequences using deep learning models offers promising avenues
for advancements in genomics and personalized medicine. This study provides a …