N6-methyladenosine-mediated gene regulation and therapeutic implications

Y Liu, D Yang, T Liu, J Chen, J Yu, P Yi - Trends in molecular medicine, 2023 - cell.com
Abstract N6-methyladenosine (m 6 A) RNA methylation is the most abundant form of mRNA
modification in eukaryotes and is at the front line of biological and biomedical research. This …

The role of ADAR1 through and beyond its editing activity in cancer

Y Jiao, Y Xu, C Liu, R Miao, C Liu, Y Wang… - Cell Communication and …, 2024 - Springer
Abstract Adenosine-to-inosine (A-to-I) editing of RNA, catalyzed by adenosine deaminase
acting on RNA (ADAR) enzymes, is a prevalent RNA modification in mammals. It has been …

Multi-ancestry genome-wide association study of kidney cancer identifies 63 susceptibility regions

MP Purdue, D Dutta, MJ Machiela, BR Gorman… - Nature …, 2024 - nature.com
Here, in a multi-ancestry genome-wide association study meta-analysis of kidney cancer
(29,020 cases and 835,670 controls), we identified 63 susceptibility regions (50 novel) …

[HTML][HTML] YY1 is regulated by ALKBH5-mediated m6A modification and promotes autophagy and cancer progression through targeting ATG4B

S Wang, J Nie, K Xu, Y Liu, W Tong, A Li, W Zuo… - Aging (Albany …, 2023 - ncbi.nlm.nih.gov
YY1 affects tumorigenesis and metastasis in multiple ways. However, the function of YY1
and the potential mechanisms through which it operates in gastric cancer (GC) progression …

Roles for epithelial integrin α3β1 in regulation of the microenvironment during normal and pathological tissue remodeling

RP Miskin, CM DiPersio - American Journal of Physiology …, 2024 - journals.physiology.org
Integrin receptors for the extracellular matrix activate intracellular signaling pathways that
are critical for tissue development, homeostasis, and regeneration/repair, and their loss or …

Coding, or non-coding, that is the question

L Poliseno, M Lanza, PP Pandolfi - Cell Research, 2024 - nature.com
The advent of high-throughput sequencing uncovered that our genome is pervasively
transcribed into RNAs that are seemingly not translated into proteins. It was also found that …

[HTML][HTML] 3'UTR diversity: expanding repertoire of RNA alterations in human mRNAs

D Hong, S Jeong - Molecules and cells, 2023 - Elsevier
Genomic information stored in the DNA is transcribed to the mRNA and translated to
proteins. The 3′ untranslated regions (3′ UTRs) of the mRNA serve pivotal roles in post …

Gastrointestinal cancer cells with Pt-resistance and relationship with aberrant expression of long non-coding RNAs

VA Ferretti, KL Klugh, KA Doucette, DC Crans… - Coordination Chemistry …, 2024 - Elsevier
The anticancer drugs cis-diamminedichloridoplatinum (II)(cisplatin) and oxaliplatin are
commonly used to treat patients with a number of cancers including gastrointestinal cancer …

Association of SOD2 rs2758339, rs5746136 and rs2842980 polymorphisms with increased risk of breast cancer: a haplotype-based case–control study

S Asadi, M Abkar, Z Zamanzadeh… - Genes & Genomics, 2023 - Springer
Background A growing body of evidence indicates that oxidative stress, high levels of
reactive oxygen species (ROS), is implicated in the pathogenesis of breast cancer (BC) …

DiffSegR: An RNA-Seq data driven method for differential expression analysis using changepoint detection

A Liehrmann, E Delannoy… - NAR Genomics and …, 2023 - academic.oup.com
To fully understand gene regulation, it is necessary to have a thorough understanding of
both the transcriptome and the enzymatic and RNA-binding activities that shape it. While …