Complex network analyses of functional connectivity have consistently revealed non-
random (modular, small-world, scale-free-like) behavior of hard-thresholded networks …

The impact of disease‐causing defects is often not limited to the products of a mutated gene
but, thanks to interactions between the molecular components, may also affect other cellular …

Background Genomic datasets generated by new technologies are increasingly prevalent in
disparate areas of biological research. While many studies have sought to characterize …

Community assembly models, usually constructed for food webs, are an important
component of our understanding of how ecological communities are formed. However …

Background Genome-scale metabolic reconstructions have been recognised as a valuable
tool for a variety of applications ranging from metabolic engineering to evolutionary studies …

There is increasing use of networks in ecology and epidemiology, but still relatively little
application in phytopathology. Networks are sets of elements (nodes) connected in various …

Species belonging to the genus Novosphingobium are found in many different habitats and
have been identified as metabolically versatile. Through comparative genomic analysis, we …

Systems biology offers the potential to provide new insights into our understanding of the
pathogenesis of complex diseases such as atherosclerosis. It seeks to comprehend the …

Despite multiple diseases co-occur, their underlying common molecular mechanisms
remain elusive. Identification of comorbid diseases by considering the interactions between …

Genomic information for outlier strains of Pseudomonas aeruginosa is exiguous when
compared with classical strains. We sequenced and constructed the complete genome of an …