Deep learning based an efficient hybrid prediction model for Covid-19 cross-country spread among E7 and G7 countries

A Utku - Decision Making: Applications in Management and …, 2023 - dmame-journal.org
The COVID-19 pandemic has caused the death of many people around the world and has
also caused economic problems for all countries in the world. In the literature, there are …

[HTML][HTML] Exploring and mitigating potential bias when genetic instrumental variables are associated with multiple non-exposure traits in Mendelian randomization

Q Yang, E Sanderson, K Tilling, MC Borges… - European Journal of …, 2022 - Springer
With the increasing size and number of genome-wide association studies, individual single
nucleotide polymorphisms are increasingly found to associate with multiple traits. Many …

[HTML][HTML] Schizophrenia-associated differential DNA methylation in brain is distributed across the genome and annotated to MAD1L1, a locus at which DNA …

BC McKinney, LL McClain, CM Hensler, Y Wei… - Translational …, 2022 - nature.com
DNA methylation (DNAm), the addition of a methyl group to a cytosine in DNA, plays an
important role in the regulation of gene expression. Single-nucleotide polymorphisms …

Phenotypic causal inference using genome-wide association study data: Mendelian randomization and beyond

VM Walker, J Zheng, TR Gaunt… - Annual review of …, 2022 - annualreviews.org
Summary statistics for genome-wide association studies (GWAS) are increasingly available
for downstream analyses. Meanwhile, the popularity of causal inference methods has grown …

Genetically regulated multi-omics study for symptom clusters of posttraumatic stress disorder highlights pleiotropy with hematologic and cardio-metabolic traits

GA Pathak, K Singh, FR Wendt, TW Fleming… - Molecular …, 2022 - nature.com
Posttraumatic stress disorder (PTSD) is a psychiatric disorder that may arise in response to
severe traumatic event and is diagnosed based on three main symptom clusters …

[HTML][HTML] Fast and flexible joint fine-mapping of multiple traits via the Sum of Single Effects model

Y Zou, P Carbonetto, D Xie, G Wang, M Stephens - bioRxiv, 2023 - ncbi.nlm.nih.gov
We introduce mvSuSiE, a multi-trait fine-mapping method for identifying putative causal
variants from genetic association data (individual-level or summary data). mvSuSiE learns …

[HTML][HTML] Inflammation status modulates the effect of host genetic variation on intestinal gene expression in inflammatory bowel disease

S Hu, WT Uniken Venema, HJ Westra… - Nature …, 2021 - nature.com
More than 240 genetic risk loci have been associated with inflammatory bowel disease
(IBD), but little is known about how they contribute to disease development in involved …

[PDF][PDF] Best practices for multi-ancestry, meta-analytic transcriptome-wide association studies: lessons from the Global Biobank Meta-analysis Initiative

A Bhattacharya, JB Hirbo, D Zhou, W Zhou, J Zheng… - Cell genomics, 2022 - cell.com
Summary The Global Biobank Meta-analysis Initiative (GBMI), through its diversity, provides
a valuable opportunity to study population-wide and ancestry-specific genetic associations …

[PDF][PDF] Smoking, DNA methylation, and lung function: a mendelian randomization analysis to investigate causal pathways

E Jamieson, R Korologou-Linden, RE Wootton… - The American Journal of …, 2020 - cell.com
Whether smoking-associated DNA methylation has a causal effect on lung function has not
been thoroughly evaluated. We first investigated the causal effects of 474 smoking …

Identifying cross-disease components of genetic risk across hospital data in the UK Biobank

A Cortes, PK Albers, CA Dendrou, L Fugger… - Nature …, 2020 - nature.com
Genetic risk factors frequently affect multiple common human diseases, providing insight into
shared pathophysiological pathways and opportunities for therapeutic development …