Photonics enabled intelligence system to identify SARS-CoV 2 mutations

BA Taha, Q Al-Jubouri, Y Al Mashhadany… - Applied Microbiology …, 2022 - Springer
Abstract The COVID-19, MERS-CoV, and SARS-CoV are hazardous epidemics that have
resulted in many deaths which caused a worldwide debate. Despite control efforts, SARS …

Real-time allelic assays of SARS-CoV-2 variants to enhance sewage surveillance

X Xu, Y Deng, J Ding, X Zheng, S Li, L Liu, H Chui… - Water Research, 2022 - Elsevier
To effectively control the ongoing outbreaks of fast-spreading SARS-CoV-2 variants, there is
an urgent need to add rapid variant detection and discrimination methods to the existing …

Rapid monitoring of SARS-CoV-2 variants of concern through high-resolution melt analysis

A Diotallevi, G Buffi, S Barocci, M Ceccarelli… - Scientific Reports, 2023 - nature.com
The current global pandemic of COVID-19 is characterized by waves of infection due to the
emergence of new SARS-CoV-2 variants carrying mutations on the Spike (S) protein gene …

CRISPR‐Cas system: A promising tool for rapid detection of SARS‐CoV‐2 variants

J Li, K Zhang, G Lin, J Li - Journal of Medical Virology, 2024 - Wiley Online Library
Abstract COVID‐19, caused by SARS‐CoV‐2, remains a global health crisis. The
emergence of multiple variants with enhanced characteristics necessitates their detection …

Machine learning-assisted real-time polymerase chain reaction and high-resolution melt analysis for SARS-CoV-2 variant identification

S Promja, J Puenpa, T Achakulvisut… - Analytical …, 2023 - ACS Publications
Since the declaration of COVID-19 as a pandemic in early 2020, multiple variants of the
severe acute respiratory syndrome-related coronavirus (SARS-CoV-2) have been detected …

[HTML][HTML] High-resolution melting analysis to discriminate between the SARS-CoV-2 Omicron variants BA. 1 and BA. 2

T Koshikawa, H Miyoshi - Biochemistry and Biophysics Reports, 2022 - Elsevier
High-resolution melting (HRM) analysis was conducted to discriminate between SARS-CoV-
2 Omicron variant BA. 1 (B. 1.1. 529.1) and subvariant BA. 2 (B. 1.1. 529.2). We performed …

High-resolution melting analysis after nested PCR for the detection of SARS-CoV-2 spike protein G339D and D796Y variations

H Miyoshi, R Ichinohe, T Koshikawa - Biochemical and Biophysical …, 2022 - Elsevier
High-resolution melting (HRM) analysis was performed to detect G339D and D796Y
variations in the SARS-CoV-2 Omicron variant spike protein. We employed two-step PCR …

The high mutation rate at the D614G hotspot-furin cleavage site region increases the priming efficiency of the Spike protein by furin protease: analysis of Indonesian …

FM Gazali, N Wijayanti, MS Hakim, E Supriyati… - Virusdisease, 2023 - Springer
D614G mutation plays a significant role in the transmissibility of SARS-CoV-2. Identification
of other mutations related to D614G mutation within the Spike protein is pivotal as they might …

Development of highly adaptable RT-PCR methods for identifying Delta and BA. 1 variants in inactivated COVID-19 vaccines

Z Wang, Y He, Z He, Y Guo, Y Zhao, Y Zhang - Molecular Biology Reports, 2024 - Springer
Background The emergence and rapid spread of coronavirus disease 2019 (COVID-19),
caused by severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), poses a …

Detection of SARS-CoV-2 spike protein D614G mutation using μTGGE

KM Juma, K Morimoto, V Sharma, K Sharma… - Molecular biology …, 2024 - Springer
Background The accurate and expeditious detection of SARS-CoV-2 mutations is critical for
monitoring viral evolution, assessing its impact on transmission, virulence, and vaccine …