Rapid clonal identification of biallelic CRISPR/Cas9 knock-ins using SNEAK PEEC

S Singh, A Banerjee, A Vanden Broeck, S Klinge - Scientific Reports, 2023 - nature.com
One of the challenges faced by current CRISPR/Cas9 editing strategies is the difficulty in
rapidly selecting clonal populations of biallelically edited cells. Here we present Surface …

Nanobodies: a new approach for the diagnosis and treatment of viral infectious diseases

P Sroga, D Safronetz, DR Stein - Future Virology, 2020 - Taylor & Francis
With the rise of viral infections and antibiotic resistance, there is a constant need for the
development of more sensitive and effective treatment and diagnostic tools. Since their …

Prediction of the binding mode and resistance profile for a dual-target pyrrolyl diketo acid scaffold against HIV-1 integrase and reverse-transcriptase-associated …

F Yang, G Zheng, T Fu, X Li, G Tu, YH Li… - Physical Chemistry …, 2018 - pubs.rsc.org
The rapid emergence of drug-resistant variants is one of the most common causes of highly
active antiretroviral therapeutic (HAART) failure in patients infected with HIV-1. Compared …

[HTML][HTML] Capsid-specific nanobody effects on HIV-1 assembly and infectivity

A Alfadhli, CA Romanaggi, RL Barklis, I Merutka… - Virology, 2021 - Elsevier
The capsid (CA) domain of the HIV-1 precursor Gag (PrGag) protein plays multiple roles in
HIV-1 replication, and is central to the assembly of immature virions, and mature virus cores …

Nanobodies in the fight against infectious diseases: repurposing nature's tiny weapons

SS Rizk, DM Moustafa, SA ElBanna… - World Journal of …, 2024 - Springer
Nanobodies are the smallest known antigen-binding molecules to date. Their small size,
good tissue penetration, high stability and solubility, ease of expression, refolding ability …

General Trends of the Camelidae Antibody VHHs Domain Dynamics

AM Vattekatte, J Diharce, J Rebehmed, F Cadet… - International Journal of …, 2023 - mdpi.com
Conformational flexibility plays an essential role in antibodies' functional and structural
stability. They facilitate and determine the strength of antigen–antibody interactions …

Nanobody engineering: computational modelling and design for biomedical and therapeutic applications

NS El Salamouni, JH Cater, LM Spenkelink… - FEBS Open Bio, 2024 - Wiley Online Library
Nanobodies, the smallest functional antibody fragment derived from camelid heavy‐chain‐
only antibodies, have emerged as powerful tools for diverse biomedical applications. In this …

Thermodynamic analysis of an entropically driven, high-affinity nanobody-HIV p24 interaction

JC Brookes, ER Gray, CN Loynachan, MJ Gut… - Biophysical …, 2023 - cell.com
Protein-protein interactions are fundamental to life processes. Complementary
computational, structural, and biophysical studies of these interactions enable the forces …

CDR grafting and site-directed mutagenesis approach for the generation and affinity maturation of Anti-CD20 nanobody

MM Heidari, EA Shirazi, SF Cheraghi… - Molecular Biology …, 2024 - Springer
Background Recently, new and advanced techniques have been adopted to design and
produce nanobodies, which are used in diagnostic and immunotherapy treatments …

Applications of molecular dynamics simulation in nanomedicine

M Didandeh, AH Souderjani, M Asgari - Nanomedicine, 2023 - Elsevier
Molecular dynamics simulation is an important tool for studying nanomedicines at the atomic
scale. Because measuring parameters at the atomic scale is very costly, the use of …