Tracking the pipeline: immunoinformatics and the COVID-19 vaccine design

S Rezaei, Y Sefidbakht… - Briefings in Bioinformatics, 2021 - academic.oup.com
With the onset of the COVID-19 pandemic, the amount of data on genomic and proteomic
sequences of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) stored in …

An almost dark galaxy with the mass of the Small Magellanic Cloud

M Montes, I Trujillo, A Karunakaran… - Astronomy & …, 2024 - aanda.org
Almost dark galaxies are objects that have eluded detection by traditional surveys such as
the Sloan Digital Sky Survey (SDSS). The low surface brightness of these galaxies (μ r (0)> …

A survey of researchers' code sharing and code reuse practices, and assessment of interactive notebook prototypes

L Cadwallader, I Hrynaszkiewicz - PeerJ, 2022 - peerj.com
This research aimed to understand the needs and habits of researchers in relation to code
sharing and reuse; gather feedback on prototype code notebooks created by NeuroLibre; …

A disk and no signatures of tidal distortion in the galaxy “lacking” dark matter NGC 1052-DF2

M Montes, I Trujillo, R Infante-Sainz… - The Astrophysical …, 2021 - iopscience.iop.org
Using ultra-deep imaging (μ g= 30.4 mag arcsec− 2; 3σ, 10''× 10''), we probed the
surroundings of the first galaxy" lacking" dark matter (DM) KKS2000 [04](NGC 1052–DF2) …

Gnuastro: visualizing the full dynamic range in color images

R Infante-Sainz, M Akhlaghi - Research Notes of the AAS, 2024 - iopscience.iop.org
Color plays a crucial role in the visualization, interpretation, and analysis of multi-
wavelength astronomical images. However, generating color images that accurately …

Repeatability, Reproducibility, Replicability, Reusability (4R) in Journals' Policies and Software/Data Management in Scientific Publications: A Survey, Discussion, and …

JA Hernández, M Colom - arXiv preprint arXiv:2312.11028, 2023 - arxiv.org
With the recognized crisis of credibility in scientific research, there is a growth of
reproducibility studies in computer science, and although existing surveys have reviewed …

Evaluation of tools for describing, reproducing and reusing scientific workflows

P Diercks, D Gläser, O Lünsdorf, M Selzer… - arXiv preprint arXiv …, 2022 - arxiv.org
In the field of computational science and engineering, workflows often entail the application
of various software, for instance, for simulation or pre-and postprocessing. Typically, these …

How to write and develop your astronomy research paper

JH Knapen, N Chamba, D Black - Nature Astronomy, 2022 - nature.com
Writing is a vital component of a modern career in scientific research. But how to write
correctly and effectively is often not included in the training that young astronomers receive …

Detecting cosmic voids via maps of geometric-optics parameters

M Peper, BF Roukema, K Bolejko - Monthly Notices of the Royal …, 2023 - academic.oup.com
Curved space–time geometric-optics maps derived from a deep photometric survey should
contain information about the 3D matter distribution and thus about cosmic voids in the …

Gnuastro: measuring radial profiles from images

R Infante-Sainz, M Akhlaghi… - Research Notes of the …, 2024 - iopscience.iop.org
Radial profiles play a crucial role in the analysis and interpretation of astronomical data,
facilitating the extraction of spatial information. However, highly customizable (for different …