[HTML][HTML] Upstream and downstream regulators of Klotho expression in chronic kidney disease

SS Li, M Sheng, ZY Sun, Y Liang, LX Yu, QF Liu - Metabolism, 2023 - Elsevier
Klotho is a critical protein that protects the kidney. Klotho is severely downregulated in
chronic kidney disease (CKD), and its deficiency is implicated in the pathogenesis and …

[HTML][HTML] Expanding PROTACtable genome universe of E3 ligases

Y Liu, J Yang, T Wang, M Luo, Y Chen, C Chen… - Nature …, 2023 - nature.com
Proteolysis-targeting chimera (PROTAC) and other targeted protein degradation (TPD)
molecules that induce degradation by the ubiquitin-proteasome system (UPS) offer new …

[HTML][HTML] Intricate confrontation: Research progress and application potential of TRIM family proteins in tumor immune escape

J Gu, J Chen, S Xiang, X Zhou, J Li - Journal of Advanced Research, 2023 - Elsevier
Background Tripartite motif (TRIM) family proteins have more than 80 members and are
widely found in various eukaryotic cells. Most TRIM family proteins participate in the …

PARP1 UFMylation ensures the stability of stalled replication forks

Y Gong, Z Wang, W Zong, R Shi… - Proceedings of the …, 2024 - National Acad Sciences
The S-phase checkpoint involving CHK1 is essential for fork stability in response to fork
stalling. PARP1 acts as a sensor of replication stress and is required for CHK1 activation …

Inhibition of CDK1 Overcomes Oxaliplatin Resistance by Regulating ACSL4‐mediated Ferroptosis in Colorectal Cancer

K Zeng, W Li, Y Wang, Z Zhang, L Zhang… - Advanced …, 2023 - Wiley Online Library
Oxaliplatin is a widely used chemotherapy drug for patients with advanced colorectal cancer
(CRC); however, frequent drug resistance limits its therapeutic efficacy in patients. Here, this …

Systematic prediction of degrons and E3 ubiquitin ligase binding via deep learning

C Hou, Y Li, M Wang, H Wu, T Li - BMC biology, 2022 - Springer
Background Degrons are short linear motifs, bound by E3 ubiquitin ligase to target protein
substrates to be degraded by the ubiquitin-proteasome system. Mutations leading to …

Defining the KRAS-and ERK-dependent transcriptome in KRAS-mutant cancers

JA Klomp, JE Klomp, CA Stalnecker, KL Bryant… - Science, 2024 - science.org
How the KRAS oncogene drives cancer growth remains poorly understood. Therefore, we
established a systemwide portrait of KRAS-and extracellular signal–regulated kinase (ERK) …

[HTML][HTML] TRIM44 promotes BRCA1 functions in HR repair to induce Cisplatin Chemoresistance in Lung Adenocarcinoma by Deubiquitinating FLNA

S Zhang, M Cao, S Yan, Y Liu, W Fan… - … Journal of Biological …, 2022 - ncbi.nlm.nih.gov
Abstract Tripartite motif-containing 44 (TRIM44) has recently been implicated in various
pathological processes in numerous cancers, including lung adenocarcinoma (LUAD); …

Cytoplasmic YAP1‐mediated ESCRT‐III assembly promotes autophagic cell death and is ubiquitinated by NEDD4L in breast cancer

Y Guo, Y Cui, Y Li, X Jin, D Wang, M Lei… - Cancer …, 2023 - Wiley Online Library
Abstract Background Nuclear Yes1‐associated transcriptional regulator (YAP1) promotes
tumor progression. However, the function of cytoplasmic YAP1 in breast cancer cells and its …

Machine learning modeling of protein-intrinsic features predicts tractability of targeted protein degradation

W Zhang, SS Roy Burman, J Chen… - Genomics …, 2022 - academic.oup.com
Targeted protein degradation (TPD) has rapidly emerged as a therapeutic modality to
eliminate previously undruggable proteins by repurposing the cell's endogenous protein …