Gut microbiota in ulcerative colitis: insights on pathogenesis and treatment

XY Guo, XJ Liu, JY Hao - Journal of digestive diseases, 2020 - Wiley Online Library
Gut microbiota constitute the largest reservoir of the human microbiome and are an
abundant and stable ecosystem—based on its diversity, complexity, redundancy, and host …

[HTML][HTML] Inferring multilayer interactome networks shaping phenotypic plasticity and evolution

D Yang, Y Jin, X He, A Dong, J Wang, R Wu - Nature Communications, 2021 - nature.com
Phenotypic plasticity represents a capacity by which the organism changes its phenotypes in
response to environmental stimuli. Despite its pivotal role in adaptive evolution, how …

[HTML][HTML] Functional mapping of phenotypic plasticity of Staphylococcus aureus under vancomycin pressure

D Yang, X Zheng, L Jiang, M Ye, X He, Y Jin… - Frontiers in …, 2021 - frontiersin.org
Phenotypic plasticity is the exhibition of various phenotypic traits produced by a single
genotype in response to environmental changes, enabling organisms to adapt to …

Bivariate genome-wide association study of the growth plasticity of Staphylococcus aureus in coculture with Escherichia coli

X Zheng, J Bai, M Ye, Y Liu, Y Jin, X He - Applied Microbiology and …, 2020 - Springer
Phenotypic plasticity is the capacity to change the phenotype in response to different
environments without alteration of the genotype. Despite sufficient evidence that …

[HTML][HTML] Interaction analyses based on growth parameters of GWAS between Escherichia coli and Staphylococcus aureus

Y Liang, B Li, Q Zhang, S Zhang, X He, L Jiang, Y Jin - AMB Express, 2021 - Springer
To accurately explore the interaction mechanism between Escherichia coli and
Staphylococcus aureus, we designed an ecological experiment to monoculture and co …

[PDF][PDF] 二代测序技术(NGS) 结合遗传统计模型在微生物分子生态学中的研究进展

梁雅静, 何晓青, 金一, 姜立波, 叶梅霞… - The Crop Journal, 2018 - researchgate.net
摘要近年来, 二代测序技术(next generation sequencing, NGS) 的出现, 使得在短时间内准确
获得微生物基因组数据成为可能, NGS 已成为微生物分子生态学研究的有力工具. NGS …

[HTML][HTML] 影响微生物互作的重要基因研究进展: 以大肠杆菌为例

李贝贝, 朱晗钊, 张琦, 杨鹏, 金一, 何晓青 - 微生物学通报, 2021 - wswxtb.ijournals.cn
微生物在自然界中广泛存在, 微生物间的相互作用对群落结构和功能有重要影响.
目前已经对微生物相互作用的机制给予了很大的关注, 通过高通量测序技术和统计学分析方法的 …

Genomes reveal the cohesiveness of bacterial species taxa and provide a path towards describing all of bacterial diversity.

FM Cohan - Trends in the systematics of bacteria and fungi, 2021 - cabidigitallibrary.org
This book chapter argues that bacterial systematists of the mid-20th century fortuitously
created a species-level systematics that actually fits an important universal theory of …