Machine learning based system for the automation of systematic literature reviews

R Pytlak, B Bukhvalova, P Cichosz… - 2023 IEEE …, 2023 - ieeexplore.ieee.org
The paper gives an overview of a machine learning-based system developed to support
systematic literature reviews (SLR). The objective of the system is to provide scientists and …

[PDF][PDF] Explaining Artificial Intelligence Predictions of Disease Progression with Semantic Similarity.

S Nunes, RT Sousa, F Serrano, R Branco… - CLEF (Working …, 2022 - ceur-ws.org
The complexity of neurodegenerative diseases has motivated the development of artificial
intelligence approaches to predicting risk of impairment and disease progression. However …

Tag me if you can! semantic annotation of biodiversity metadata with the QEMP corpus and the BiodivTagger

F Löffler, N Abdelmageed, S Babalou… - Proceedings of the …, 2020 - aclanthology.org
Dataset Retrieval is gaining importance due to a large amount of research data and the
great demand for reusing scientific data. Dataset Retrieval is mostly based on metadata …

[PDF][PDF] IAM at CLEF eHealth 2020: Concept Annotation in Spanish Electronic Health Records.

S Cossin, V Jouhet - CLEF (Working Notes), 2020 - ceur-ws.org
In this paper, we describe the approach and the results of our participation in task 1
(multilingual information extraction) of the CLEF eHealth 2020 challenge. We tackled the …

Identifying datasets for cross-study analysis in dbGap using PhenX

H Pan, V Bakalov, L Cox, ML Engle, SW Erickson… - Scientific Data, 2022 - nature.com
Identifying relevant studies and harmonizing datasets are major hurdles for data reuse.
Common Data Elements (CDEs) can help identify comparable study datasets and reduce …

Leveraging network analysis to evaluate biomedical named entity recognition tools

EP García del Valle, G Lagunes García… - Scientific Reports, 2021 - nature.com
The ever-growing availability of biomedical text sources has resulted in a boost in clinical
studies based on their exploitation. Biomedical named-entity recognition (bio-NER) …

Implicit entity linking in tweets: An ad-hoc retrieval approach

H Hosseini, TT Nguyen, J Wu, E Bagheri - Applied Ontology, 2019 - content.iospress.com
Within the context of Twitter analytics, the notion of implicit entity linking has recently been
introduced to refer to the identification of a named entity, which is central to the topic of the …

Biotea: semantics for pubmed central

A Garcia, F Lopez, L Garcia, O Giraldo, V Bucheli… - PeerJ, 2018 - peerj.com
A significant portion of biomedical literature is represented in a manner that makes it difficult
for consumers to find or aggregate content through a computational query. One approach to …

Collaborative Semantic Annotation Tooling (CoAT) to Improve Efficiency and Plug-and-Play Semantic Interoperability in the Secondary Use of Medical Data: Concept …

T Wiktorin, D Grigutsch, F Erdfelder, AJ Heidel… - Applied Sciences, 2024 - mdpi.com
Featured Application Within the context of the Medical Informatics Initiative (MII) funded by
the Federal Ministry of Research and Education (BMBF), German academic medicine …

Proficient Annotation Recommendation in a Biomedical Content Authoring Environment

A Abbas, S Mbouadeu, A Bisram, N Iqbal… - … Knowledge Graphs and …, 2022 - Springer
Given the ubiquity of unstructured biomedical data, significant obstacles still remain in
achieving accurate and fast access to online biomedical content. Accompanying semantic …