[HTML][HTML] The analysis of the human megakaryocyte and platelet coding transcriptome in healthy and diseased subjects

K De Wispelaere, K Freson - International Journal of Molecular Sciences, 2022 - mdpi.com
Platelets are generated and released into the bloodstream from their precursor cells,
megakaryocytes that reside in the bone marrow. Though platelets have no nucleus or DNA …

ProBac-seq, a bacterial single-cell RNA sequencing methodology using droplet microfluidics and large oligonucleotide probe sets

P Samanta, SF Cooke, R McNulty, S Hormoz… - Nature …, 2024 - nature.com
Methods that measure the transcriptomic state of thousands of individual cells have
transformed our understanding of cellular heterogeneity in eukaryotic cells since their …

[HTML][HTML] Liver in infections: a single-cell and spatial transcriptomics perspective

J Zou, J Li, X Zhong, D Tang, X Fan, R Chen - Journal of biomedical …, 2023 - Springer
The liver is an immune organ that plays a vital role in the detection, capture, and clearance
of pathogens and foreign antigens that invade the human body. During acute and chronic …

[HTML][HTML] Traumatic brain injury promotes neurogenesis at the cost of astrogliogenesis in the adult hippocampus of male mice

P Bielefeld, A Martirosyan, S Martín-Suárez… - Nature …, 2024 - nature.com
Traumatic brain injury (TBI) can result in long-lasting changes in hippocampal function. The
changes induced by TBI on the hippocampus contribute to cognitive deficits. The adult …

Cellsnake: a user-friendly tool for single-cell RNA sequencing analysis

SU Umu, K Rapp Vander-Elst, VT Karlsen… - …, 2023 - academic.oup.com
Background Single-cell RNA sequencing (scRNA-seq) provides high-resolution
transcriptome data to understand the heterogeneity of cell populations at the single-cell …

[HTML][HTML] Gene expression in organoids: an expanding horizon

A Smirnov, G Melino, E Candi - Biology Direct, 2023 - Springer
Recent development of human three-dimensional organoid cultures has opened new doors
and opportunities ranging from modelling human development in vitro to personalised …

[HTML][HTML] APE1 promotes radiation resistance against radiation-induced pyroptosis by inhibiting the STING pathway in lung adenocarcinoma

J Zhou, Z Wei, C Yang, D Jia, B Pan, Y Zeng, D Sun… - Translational …, 2023 - Elsevier
Mammalian apurinic/apyrimidinic endonuclease 1 (APE1, APEX1) is a multifunctional
enzyme that maintains cellular homeostasis. It is involved in the base excision repair (BER) …

[HTML][HTML] Unveiling heterogeneity in MSCs: exploring marker-based strategies for defining MSC subpopulations

S Chen, B Liang, J Xu - Journal of Translational Medicine, 2024 - Springer
Mesenchymal stem/stromal cells (MSCs) represent a heterogeneous cell population
distributed throughout various tissues, demonstrating remarkable adaptability to …

[HTML][HTML] The effects of NDM-5 on Escherichia coli and the screening of interacting proteins

L Li, Y Gao, L Wang, F Lu, Q Ji, Y Zhang… - Frontiers in …, 2024 - frontiersin.org
Carbapenem-resistant Escherichia coli (E. coli) strains are widely distributed and spreading
rapidly, creating significant challenges for clinical therapeutics. NDM-5, a novel mutant of …

Single-Soma Deep RNA Sequencing of Human Dorsal Root Ganglion Neurons Reveals Novel Molecular and Cellular Mechanisms Underlying Somatosensation

H Yu, D Usoskin, SS Nagi, Y Hu, J Kupari, O Bouchatta… - bioRxiv, 2023 - biorxiv.org
The versatility of somatosensation arises from heterogeneous dorsal root ganglion (DRG)
neurons. However, soma transcriptomes of individual human DRG (hDRG) neurons–critical …