Candida parapsilosis: from genes to the bedside

R Tóth, J Nosek, HM Mora-Montes… - Clinical microbiology …, 2019 - Am Soc Microbiol
Patients with suppressed immunity are at the highest risk for hospital-acquired infections.
Among these, invasive candidiasis is the most prevalent systemic fungal nosocomial …

Systems biology and machine learning in plant–pathogen interactions

B Mishra, N Kumar, MS Mukhtar - Molecular Plant-Microbe …, 2019 - Am Phytopath Society
Systems biology is an inclusive approach to study the static and dynamic emergent
properties on a global scale by integrating multiomics datasets to establish qualitative and …

The hidden world within plants: metatranscriptomics unveils the complexity of wood microbiomes

L Nerva, JF Garcia, F Favaretto… - Journal of …, 2022 - academic.oup.com
The importance of plants as complex entities influenced by genomes of the associated
microorganisms is now seen as a new source of variability for a more sustainable …

High-resolution analysis of the pneumococcal transcriptome under a wide range of infection-relevant conditions

R Aprianto, J Slager, S Holsappel… - Nucleic acids …, 2018 - academic.oup.com
Streptococcus pneumoniae is an opportunistic human pathogen that typically colonizes the
nasopharyngeal passage and causes lethal disease in other host niches, such as the lung …

Dual RNA‐sequencing analyses of a coral and its native symbiont during the establishment of symbiosis

AR Mohamed, N Andrade, A Moya, CX Chan… - Molecular …, 2020 - Wiley Online Library
Despite the ecological significance of the mutualistic relationship between Symbiodiniaceae
and reef‐building corals, the molecular interactions during establishment of this relationship …

Clostridioides difficile LuxS mediates inter-bacterial interactions within biofilms

RT Slater, LR Frost, SE Jossi, AD Millard… - Scientific reports, 2019 - nature.com
The anaerobic gut pathogen, Clostridioides difficile, forms adherent biofilms that may play
an important role in recurrent C. difficile infections. The mechanisms underlying C. difficile …

Pneumolysin promotes host cell necroptosis and bacterial competence during pneumococcal meningitis as shown by whole-animal dual RNA-seq

KK Jim, R Aprianto, R Koning, A Domenech… - Cell reports, 2022 - cell.com
Pneumolysin is a major virulence factor of Streptococcus pneumoniae that plays a key role
in interaction with the host during invasive disease. How pneumolysin influences these …

[HTML][HTML] Epigenetics, microbiota, and intraocular inflammation: New paradigms of immune regulation in the eye

X Wen, X Hu, L Miao, X Ge, Y Deng, PW Bible… - Progress in Retinal and …, 2018 - Elsevier
Sight threatening immune responses that damage the eye characterize intraocular
inflammatory diseases. These diseases including uveitis and age-related macular …

[HTML][HTML] Triple RNA-seq reveals synergy in a human virus-fungus co-infection model

B Seelbinder, J Wallstabe, L Marischen, E Weiss… - Cell reports, 2020 - cell.com
High-throughput RNA sequencing (RNA-seq) is routinely applied to study diverse biological
processes; however, when performed separately on interacting organisms, systemic noise …

Transcriptome Analyses of Barley Roots Inoculated with Novel Paenibacillus sp. and Erwinia gerundensis Strains Reveal Beneficial Early-Stage Plant–Bacteria …

T Li, R Mann, J Kaur, G Spangenberg, T Sawbridge - Plants, 2021 - mdpi.com
Plant growth-promoting bacteria can improve host plant traits including nutrient uptake and
metabolism and tolerance to biotic and abiotic stresses. Understanding the molecular basis …