Parallelized stochastic cutoff method for long-range interacting systems

E Endo, Y Toga, M Sasaki - Journal of the Physical Society of Japan, 2015 - journals.jps.jp
We present a method of parallelizing the stochastic cutoff (SCO) method, which is a Monte-
Carlo method for long-range interacting systems. After interactions are eliminated by the …

Exact distributed kinetic Monte Carlo simulations for on-lattice chemical kinetics: lessons learnt from medium-and large-scale benchmarks

GD Savva, RL Benson, IA Christidi… - … Transactions of the …, 2023 - royalsocietypublishing.org
Kinetic Monte Carlo (KMC) simulations have been instrumental in multiscale catalysis
studies, enabling the elucidation of the complex dynamics of heterogeneous catalysts and …

Information criteria for quantifying loss of reversibility in parallelized KMC

K Gourgoulias, MA Katsoulakis, L Rey-Bellet - Journal of Computational …, 2017 - Elsevier
Abstract Parallel Kinetic Monte Carlo (KMC) is a potent tool to simulate stochastic particle
systems efficiently. However, despite literature on quantifying domain decomposition errors …

A rigorous sequential update strategy for parallel kinetic Monte Carlo simulation

JP Nilmeier, J Marian - Computer Physics Communications, 2014 - Elsevier
Abstract The kinetic Monte Carlo (kMC) method is used in many scientific fields in
applications involving rare-event transitions. Due to its discrete stochastic nature, efforts to …

[图书][B] Multiscale modeling and simulation of damage by void nucleation and growth

CR Romo - 2011 - search.proquest.com
Voids are observed to be generated under sufficient loading in many materials, ranging from
polymers and metals to biological tissues. The presence of these voids can have drastic …

Optimizing parallel kinetic Monte Carlo simulation by communication aggregation and scheduling

B Wu, S Li, Y Zhang - Big Data Technology and Applications: First …, 2016 - Springer
Abstract Kinetic Monte Carlo (KMC) algorithm has been widely applied for simulation of
radiation damage, grain growth and chemical reactions. To simulate at a large temporal and …

Accurate meso-scale dynamics by kinetic Monte Carlo simulation via free energy multicanonical sampling: oxygen vacancy diffusion in BaTiO3

H Nakata, M Araidai, S Bai, H Hirano… - Science and Technology …, 2021 - Taylor & Francis
ABSTRACT A conceptually accurate method to connect the free energy multicanonical
sampling to meso-scale kinetic Monte Carlo (kMC) dynamics is proposed. The required …

[图书][B] A Discrete Stochastic Method for Modeling Non-Conservative Plastic Dislocation Processes

C McElfresh - 2022 - search.proquest.com
Non-conservative processes play a fundamental role in plasticity and are behind important
macroscopic phenomena such as creep, dynamic strain aging, loop raft formation, etc. In the …

A Multiscale Computational Framework for Simulating Thrombus Growth Under Flow

KN Shankar - 2023 - search.proquest.com
Modeling thrombus growth in pathological flows allows evaluation of risk under patient-
specific pharmacological, hematological, and hemodynamical conditions. To this end, we …

Simulation of defect evolution in irradiated materials of interest for nuclear fusion using a GPU-OKMC method

F Jiménez Piñero - 2023 - docta.ucm.es
In this chapter, the Green's Function Reaction Dynamics (GFRD) method is introduced and
its application to our work is explained. Special attention is given to the use of GFRD in …