[HTML][HTML] Assessing the potential contribution of in silico studies in discovering drug candidates that interact with various SARS-CoV-2 receptors

AGA Mushebenge, SC Ugbaja, NA Mbatha… - International Journal of …, 2023 - mdpi.com
The COVID-19 pandemic has spurred intense research efforts to identify effective treatments
for SARS-CoV-2. In silico studies have emerged as a powerful tool in the drug discovery …

[HTML][HTML] The importance of good practices and false hits for QSAR-driven virtual screening real application: a SARS-CoV-2 main protease (Mpro) case study

MSM Serafim, SQ Pantaleão, EB da Silva… - Frontiers in Drug …, 2023 - frontiersin.org
Computer-Aided Drug Design (CADD) approaches, such as those employing quantitative
structure-activity relationship (QSAR) methods, are known for their ability to uncover novel …

[HTML][HTML] MD–ligand–receptor: a high-performance computing tool for characterizing ligand–receptor binding interactions in molecular dynamics trajectories

M Pieroni, F Madeddu, J Di Martino, M Arcieri… - International Journal of …, 2023 - mdpi.com
Molecular dynamics simulation is a widely employed computational technique for studying
the dynamic behavior of molecular systems over time. By simulating macromolecular …

Molecular drug simulation and experimental validation of the CD36 receptor competitively binding to Long-Chain fatty acids by 7-Ketocholesteryl-9-carboxynonanoate

C Fu, ML Xiang, S Chen, G Dong, Z Liu, CB Chen… - ACS …, 2023 - ACS Publications
Long-chain fatty acids (LCFAs) are one of the main energy-supplying substances in the
body. LCFAs with different lengths and saturations may have contrasting biological effects …

[HTML][HTML] Drug repurposing: a nexus of innovation, science, and potential

MC De Rosa, R Purohit, AT García-Sosa - Scientific Reports, 2023 - nature.com
The urgency of finding therapeutic solutions for emerging and existing health challenges
has never been more pronounced. In the pursuit of this goal, the value of a strategy that …

[HTML][HTML] Binding behavior of receptor binding domain of the SARS-CoV-2 virus and ivermectin

KR Gossen, M Zhang, ZL Nikolov, SD Fernando… - Scientific Reports, 2024 - nature.com
The COVID-19 pandemic, caused by severe acute respiratory syndrome coronavirus 2
(SARS-CoV-2), sparked an international debate on effective ways to prevent and treat the …

ALDELE: All-purpose deep learning toolkits for predicting the biocatalytic activities of enzymes

X Wang, D Quinn, TS Moody… - Journal of Chemical …, 2024 - ACS Publications
Rapidly predicting enzyme properties for catalyzing specific substrates is essential for
identifying potential enzymes for industrial transformations. The demand for sustainable …

How the strength of proteins interactions affects the phase behavior of protein complexes

Q Jiao, H Ye, N Lv, M Huang, R Wu, T Yang, Z Cao… - Food …, 2024 - Elsevier
How the protein− protein interactions affect the phase behaviour of protein complexes can
afford technical support for the application of egg white protein in food industry. Here the …

Synthesis, docking studies and biological evaluation of 1H-1, 2, 3-triazole-7-chloroquinoline derivatives against SARS-CoV-2

JPL Ng, YX Yun, AA Nasim, A Gianoncelli, BYK Law… - Bioorganic …, 2023 - Elsevier
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a single-stranded
enveloped positive RNA virus and the cause of the ongoing coronavirus disease 2019 …

Clinical validation of SARS-CoV-2 electrochemical immunosensor based on the spike-ACE2 complex

V Vásquez, J Orozco - Journal of Virological Methods, 2024 - Elsevier
Background and aims Advances in health, especially in prevention, diagnosis, and
treatment, have significantly impacted the way of facing emerging infectious diseases. Yet …