Evolutionary genetics of human enterovirus 71: origin, population dynamics, natural selection, and seasonal periodicity of the VP1 gene
ABSTRACT Human enterovirus 71 (EV-71) is one of the major etiologic causes of hand, foot,
and mouth disease (HFMD) among young children worldwide, with fatal instances of …
and mouth disease (HFMD) among young children worldwide, with fatal instances of …
[PDF][PDF] HIV evolutionary dynamics within and among hosts
The HIV evolutionary processes continuously unfold, leaving a measurable footprint in viral
gene sequences. A variety of statistical models and inference techniques have been …
gene sequences. A variety of statistical models and inference techniques have been …
Beyond race and place: distal sociological determinants of HIV disparities
MLG Buot, JP Docena, BK Ratemo, MJ Bittner… - PloS one, 2014 - journals.plos.org
Informed behavior change as an HIV prevention tool has yielded unequal successes across
populations. Despite decades of HIV education, some individuals remain at high risk. The …
populations. Despite decades of HIV education, some individuals remain at high risk. The …
Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups
We explored the epidemic history of HIV-1 subtype B in the United Kingdom by using
statistical methods that infer the population history of pathogens from sampled gene …
statistical methods that infer the population history of pathogens from sampled gene …
Viral phylodynamics and the search for an 'effective number of infections'
Information on the dynamics of the effective population size over time can be obtained from
the analysis of phylogenies, through the application of time-varying coalescent models. This …
the analysis of phylogenies, through the application of time-varying coalescent models. This …
Molecular epidemiology of HIV-1 infection in Europe: An overview
A Beloukas, A Psarris, P Giannelou, E Kostaki… - Infection, Genetics and …, 2016 - Elsevier
Abstract Human Immunodeficiency Virus type 1 (HIV-1) is characterised by vast genetic
diversity. Globally circulating HIV-1 viruses are classified into distinct phylogenetic strains …
diversity. Globally circulating HIV-1 viruses are classified into distinct phylogenetic strains …
The evolution of HIV: inferences using phylogenetics
Molecular phylogenetics has revolutionized the study of not only evolution but also disparate
fields such as genomics, bioinformatics, epidemiology, ecology, microbiology, molecular …
fields such as genomics, bioinformatics, epidemiology, ecology, microbiology, molecular …
Temporal and spatial dynamics of human immunodeficiency virus type 1 circulating recombinant forms 08_BC and 07_BC in Asia
Human immunodeficiency virus type 1 (HIV-1) CRF08_BC and CRF07_BC are two major
recombinants descended from subtypes B′ and C. Despite their massive epidemic impact …
recombinants descended from subtypes B′ and C. Despite their massive epidemic impact …
[PDF][PDF] Molecular epidemiology of HIV-1 variants in the global AIDS pandemic: an update
MM Thomson, R Nájera - AIDS Rev, 2005 - researchgate.net
The picture of HIV-1 genetic diversity in the global pandemic continues to evolve.
Identification of new variants, including circulating and unique recombinant forms …
Identification of new variants, including circulating and unique recombinant forms …
Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach
Background The prevalence and the origin of HIV-1 subtype B, the most prevalent
circulating clade among the long-term residents in Europe, have been studied extensively …
circulating clade among the long-term residents in Europe, have been studied extensively …