[HTML][HTML] HIV-1 subtype B: Traces of a pandemic

DM Junqueira, SE de Matos Almeida - Virology, 2016 - Elsevier
Human migration is a major process that shaped the origin and dissemination of HIV. Within
HIV-1, subtype B (HIV-1B) is the most disseminated variant and it is assumed to be the …

Impact of clade, geography, and age of the epidemic on HIV-1 neutralization by antibodies

P Hraber, BT Korber, AS Lapedes, RT Bailer… - Journal of …, 2014 - Am Soc Microbiol
Neutralizing antibodies (nAbs) are a high priority for vaccines that aim to prevent the
acquisition of HIV-1 infection. Vaccine effectiveness will depend on the extent to which …

Quantifying differences in the tempo of human immunodeficiency virus type 1 subtype evolution

AB Abecasis, AM Vandamme, P Lemey - Journal of virology, 2009 - Am Soc Microbiol
Human immunodeficiency virus type 1 (HIV-1) genetic diversity, due to its high evolutionary
rate, has long been identified as a main cause of problems in the development of an efficient …

The evolutionary and epidemiological dynamics of the paramyxoviridae

LW Pomeroy, ON Bjørnstad, EC Holmes - Journal of Molecular Evolution, 2008 - Springer
Paramyxoviruses are responsible for considerable disease burden in human and wildlife
populations: measles and mumps continue to affect the health of children worldwide, while …

HIV genetic diversity: biological and public health consequences

IF Butler, I Pandrea, PA Marx, C Apetrei - Current HIV research, 2007 - ingentaconnect.com
The devastating consequences of AIDS pandemic will probably only be controlled when a
vaccine is developed that is safe, effective, affordable, and simple enough to permit …

Use of phylogenetics in the molecular epidemiology and evolutionary studies of viral infections

TTY Lam, CC Hon, JW Tang - Critical reviews in clinical laboratory …, 2010 - Taylor & Francis
Since DNA sequencing techniques first became available almost 30 years ago, the amount
of nucleic acid sequence data has increased enormously. Phylogenetics, which is widely …

Human Immunodeficiency Virus Type 1 env Evolves toward Ancestral States upon Transmission to a New Host

JT Herbeck, DC Nickle, GH Learn, GS Gottlieb… - Journal of …, 2006 - Am Soc Microbiol
Selecting human immunodeficiency virus (HIV) sequences for inclusion within vaccines has
been a difficult problem, as circulating HIV strains evolve relentlessly and become …

Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions

S Hué, AE Brown, M Ragonnet-Cronin, SJ Lycett… - Aids, 2014 - journals.lww.com
Objective: HIV-1 subtype B infections are associated with MSM in the UK. Yet, around 13%
of subtype B infections are found in those reporting heterosexual contact as transmission …

Prospects of elimination of HIV with test-and-treat strategy

ME Kretzschmar… - Proceedings of the …, 2013 - National Acad Sciences
Recently, there has been much debate about the prospects of eliminating HIV from high
endemic countries by a test-and-treat strategy. This strategy entails regular HIV testing in the …

Origin and evolutionary history of HIV-1 subtype C in Brazil

G Bello, CPB Passaes, ML Guimaraes, RS Lorete… - Aids, 2008 - journals.lww.com
Objective: To investigate the origin and to reconstruct the onset date of the HIV-1 subtype C
epidemic in Brazil. Design: Three independent datasets of subtype C sequences isolated …