The HIV epidemic: high-income countries

SH Vermund, AJ Leigh-Brown - Cold Spring …, 2012 - perspectivesinmedicine.cshlp.org
The HIV epidemic in higher-income nations is driven by receptive anal intercourse, injection
drug use through needle/syringe sharing, and, less efficiently, vaginal intercourse. Alcohol …

Demographic history of HIV-1 subtypes B and F in Brazil

G Bello, WA Eyer-Silva, JC Couto-Fernandez… - Infection, Genetics and …, 2007 - Elsevier
The reconstruction of the epidemic history of several HIV populations, by using methods that
infer the population history from sampled gene sequence data, has revealed important …

The hepatitis C virus epidemic in Cameroon: genetic evidence for rapid transmission between 1920 and 1960

R Njouom, E Nerrienet, M Dubois, G Lachenal… - Infection, Genetics and …, 2007 - Elsevier
Hepatitis C virus (HCV) infection in Cameroon is characterized by widespread seropositivity
and great virus genetic diversity (3 genotypes and over 10 subtypes). A total of 244 HCV …

Comparative population dynamics of HIV-1 subtypes B and C: subtype-specific differences in patterns of epidemic growth

PR Walker, OG Pybus, A Rambaut… - Infection, Genetics and …, 2005 - Elsevier
The human immunodeficiency virus (HIV) pandemic continues to grow at an alarming rate,
with a further 5 million new infections in 2003. Some 3.5 million of these were in sub …

[PDF][PDF] Divergence dating using mixed effects clock modelling: An application to HIV-1

M Bletsa, MA Suchard, X Ji, S Gryseels… - Virus …, 2019 - academic.oup.com
The need to estimate divergence times in evolutionary histories in the presence of various
sources of substitution rate variation has stimulated a rich development of relaxed molecular …

Reviewing the history of HIV-1: spread of subtype B in the Americas

DM Junqueira, RM de Medeiros, MCC Matte… - PloS one, 2011 - journals.plos.org
The dispersal of HIV-1 subtype B (HIV-1B) is a reflection of the movement of human
populations in response to social, political, and geographical issues. The initial …

In search of covariates of HIV-1 subtype B spread in the United States—a cautionary tale of large-scale Bayesian phylogeography

SL Hong, S Dellicour, B Vrancken, MA Suchard… - Viruses, 2020 - mdpi.com
Infections with HIV-1 group M subtype B viruses account for the majority of the HIV epidemic
in the Western world. Phylogeographic studies have placed the introduction of subtype B in …

Cross-reactivity of anti–HIV-1 T cell immune responses among the major HIV-1 clades in HIV-1–positive individuals from 4 continents

PM Coplan, SB Gupta, SA Dubey… - The Journal of …, 2005 - academic.oup.com
Background The genetic diversity of human immunodeficiency virus type 1 (HIV-1) raises the
question of whether vaccines that include a component to elicit antiviral T cell immunity …

Genetic and epidemiological insights into the emergence of peste des petits ruminants virus (PPRV) across Asia and Africa

A Padhi, L Ma - Scientific reports, 2014 - nature.com
Small ruminants are important components in the livelihood of millions of households in
many parts of the world. The spread of the highly contagious peste des petits ruminants …

Genotypic and functional impact of HIV-1 adaptation to its host population during the North American epidemic

LA Cotton, XT Kuang, AQ Le, JM Carlson, B Chan… - PLoS …, 2014 - journals.plos.org
HLA-restricted immune escape mutations that persist following HIV transmission could
gradually spread through the viral population, thereby compromising host antiviral immunity …