M Metkar, CS Pepin, MJ Moore - Nature Reviews Drug Discovery, 2024 - nature.com
Abstract mRNA medicine is a new and rapidly developing field in which the delivery of genetic information in the form of mRNA is used to direct therapeutic protein production in …
M McMillan, N Gomez, C Hsieh, M Bekier, X Li… - Molecular cell, 2023 - cell.com
RNA methylation at adenosine N6 (m6A) is one of the most common RNA modifications, impacting RNA stability, transport, and translation. Previous studies uncovered RNA …
BJ Petri, CM Klinge - Journal of molecular endocrinology, 2023 - jme.bioscientifica.com
Epitranscriptomic modification of RNA regulates human development, health, and disease. The true diversity of the transcriptome in breast cancer including chemical modification of …
M Bernetti, G Bussi - Current Opinion in Structural Biology, 2023 - Elsevier
Conformational dynamics is crucial for ribonucleic acid (RNA) function. Techniques such as nuclear magnetic resonance, cryo-electron microscopy, small-and wide-angle X-ray …
Nearest neighbor parameters for estimating the folding stability of RNA secondary structures are in widespread use. For helices, current parameters penalize terminal AU base pairs …
WT Hsu, V Piomponi, PT Merz, G Bussi… - Journal of Chemical …, 2023 - ACS Publications
Performing alchemical transformations, in which one molecular system is nonphysically changed to another system, is a popular approach adopted in performing free energy …
X Ou, Y Zhang, Y Xiong, Y Xiao - Journal of Chemical Information …, 2022 - ACS Publications
RNA molecules carry out various cellular functions, and understanding the mechanisms behind their functions requires the knowledge of their 3D structures. Different types of …
S Ghosh, S Takahashi, D Banerjee… - Nucleic Acids …, 2023 - academic.oup.com
RNA performs various spatiotemporal functions in living cells. As the solution environments significantly affect the stability of RNA duplexes, a stability prediction of the RNA duplexes in …
MF Allan, A Brivanlou, S Rouskin - Trends in Biochemical Sciences, 2023 - cell.com
RNA viruses are diverse and abundant pathogens that are responsible for numerous human diseases. RNA viruses possess relatively compact genomes and have therefore evolved …