Development of multi epitope subunit vaccines against emerging carp viruses Cyprinid herpesvirus 1 and 3 using immunoinformatics approach

NA Rani, TB Robin, AA Prome, N Ahmed, AT Moin… - Scientific Reports, 2024 - nature.com
Cyprinid herpesvirus is a causative agent of a destructive disease in common and koi carp
(Cyprinus carpio), which leads to substantial global financial losses in aquaculture …

Immunoinformatics approach to design novel subunit vaccine against the Epstein-Barr virus

AT Moin, RB Patil, T Tabassum, Y Araf… - Microbiology …, 2022 - Am Soc Microbiol
Epstein-Barr virus (EBV) is a lymphotropic virus responsible for numerous epithelial and
lymphoid cell malignancies, including gastric carcinoma, Hodgkin's lymphoma …

Insight into the mechanism of allosteric activation of PI3Kα by oncoprotein K-Ras4B

X Li, J Dai, D Ni, X He, H Zhang, J Zhang, Q Fu… - International journal of …, 2020 - Elsevier
Ras is a key member in the superfamily of small GTPase. Transforming between GTP-bound
active state and GDP-bound inactive state in response to exogenous signals, Ras serves as …

Autopromotion of K-Ras4B feedback activation through an SOS-mediated long-range allosteric effect

X He, K Du, Y Wang, J Fan, M Li, D Ni, S Lu… - Frontiers in Molecular …, 2022 - frontiersin.org
The Ras-specific guanine nucleotide exchange factors Son of Sevenless (SOS) regulates
Ras activation by converting inactive GDP-bound to active GTP-bound states. The catalytic …

Probing the acting mode and advantages of RMC-4550 as an Src-homology 2 domain-containing protein tyrosine phosphatase (SHP2) inhibitor at molecular level …

RR Wang, WS Liu, L Zhou, Y Ma… - Journal of Biomolecular …, 2019 - Taylor & Francis
The over-activation of Ras/mitogen-activated protein kinase (MAPK) signaling pathway
associated with a variety of cancers is usually related with abnormal activation of Src …

Revealing binding selectivity of inhibitors toward bromodomain-containing proteins 2 and 4 using multiple short molecular dynamics simulations and free energy …

LF Wang, Y Wang, ZY Yang, J Zhao… - SAR and QSAR in …, 2020 - Taylor & Francis
Emerging evidences indicate bromodomain-containing proteins 2 and 4 (BRD2 and BRD4)
play critical roles in cancers, inflammations, cardiovascular diseases and other pathologies …

In vitro and in silico investigation of effects of antimicrobial peptides from Solanaceae plants against rice sheath blight pathogen Rhizoctinia solani

T Mustapha, T Zubair, RB Patil, BA Bhongade… - Plos one, 2024 - journals.plos.org
Rhizoctonia solani, the causative agent of sheath blight disease in rice, poses a significant
threat to agricultural productivity. Traditional management approaches involving chemical …

Microsecond molecular dynamics simulations reveal the allosteric regulatory mechanism of p53 R249S mutation in p53-associated liver cancer

X Liu, W Tian, J Cheng, D Li, T Liu, L Zhang - Computational biology and …, 2020 - Elsevier
The tumor suppressor p53, a transcription factor, plays a critical role in many cellular
processes, including DNA repair and apoptosis and cell cycle arrest. Missense mutations in …

How does the novel T315L mutation of breakpoint cluster region-abelson (BCR-ABL) kinase confer resistance to ponatinib: a comparative molecular dynamics …

H Zhang, X He, D Ni, L Mou, X Chen… - Journal of Biomolecular …, 2019 - Taylor & Francis
Acute lymphocytic leukemia (ALL) is one of the most dangerous types of leukemia, and
about 40% of them is Philadelphia chromosome-positive acute lymphocytic leukemia (Ph+ …

Mechanistic influence of discreet conformation of human telomerase linker region

VP Talati, V Karn, N Gadewal… - Journal of Biomolecular …, 2024 - Taylor & Francis
Approximately 90% of malignancies have been shown to have human telomerase activity,
establishing it as a viable therapeutic target. The crystal structure of telomerase was …