[HTML][HTML] Host genetics and infectious disease: new tools, insights and translational opportunities

AJ Kwok, A Mentzer, JC Knight - Nature Reviews Genetics, 2021 - nature.com
Understanding how human genetics influence infectious disease susceptibility offers the
opportunity for new insights into pathogenesis, potential drug targets, risk stratification …

Host–parasite co-evolution and its genomic signature

D Ebert, PD Fields - Nature Reviews Genetics, 2020 - nature.com
Studies in diverse biological systems have indicated that host–parasite co-evolution is
responsible for the extraordinary genetic diversity seen in some genomic regions, such as …

The inflated significance of neutral genetic diversity in conservation genetics

JC Teixeira, CD Huber - Proceedings of the National …, 2021 - National Acad Sciences
The current rate of species extinction is rapidly approaching unprecedented highs, and life
on Earth presently faces a sixth mass extinction event driven by anthropogenic activity …

The landscape of tolerated genetic variation in humans and primates

H Gao, T Hamp, J Ede, JG Schraiber, J McRae… - Science, 2023 - science.org
Personalized genome sequencing has revealed millions of genetic differences between
individuals, but our understanding of their clinical relevance remains largely incomplete. To …

[HTML][HTML] Natural selection and infectious disease in human populations

EK Karlsson, DP Kwiatkowski, PC Sabeti - Nature Reviews Genetics, 2014 - nature.com
The ancient biological'arms race'between microbial pathogens and humans has shaped
genetic variation in modern populations, and this has important implications for the growing …

[HTML][HTML] Genomic evidence of rapid and stable adaptive oscillations over seasonal time scales in Drosophila

AO Bergland, EL Behrman, KR O'Brien… - PLoS …, 2014 - journals.plos.org
In many species, genomic data have revealed pervasive adaptive evolution indicated by the
fixation of beneficial alleles. However, when selection pressures are highly variable along a …

Balancing selection maintains hyper-divergent haplotypes in Caenorhabditis elegans

D Lee, S Zdraljevic, L Stevens, Y Wang… - Nature ecology & …, 2021 - nature.com
Across diverse taxa, selfing species have evolved independently from outcrossing species
thousands of times. The transition from outcrossing to selfing decreases the effective …

Detection of human adaptation during the past 2000 years

Y Field, EA Boyle, N Telis, Z Gao, KJ Gaulton, D Golan… - Science, 2016 - science.org
Detection of recent natural selection is a challenging problem in population genetics. Here
we introduce the singleton density score (SDS), a method to infer very recent changes in …

Determinants of mutation rate variation in the human germline

L Ségurel, MJ Wyman… - Annual review of genomics …, 2014 - annualreviews.org
Because germline mutations are the source of all evolutionary adaptations and heritable
diseases, characterizing their properties and the rate at which they arise across individuals …

[HTML][HTML] Genome-wide inference of ancestral recombination graphs

MD Rasmussen, MJ Hubisz, I Gronau, A Siepel - PLoS genetics, 2014 - journals.plos.org
The complex correlation structure of a collection of orthologous DNA sequences is uniquely
captured by the “ancestral recombination graph”(ARG), a complete record of coalescence …