Post-translational modifications in proteins: resources, tools and prediction methods

S Ramazi, J Zahiri - Database, 2021 - academic.oup.com
Posttranslational modifications (PTMs) refer to amino acid side chain modification in some
proteins after their biosynthesis. There are more than 400 different types of PTMs affecting …

Acetylation in the regulation of autophagy

Y Xu, W Wan - Autophagy, 2023 - Taylor & Francis
Post-translational modifications, such as phosphorylation, ubiquitination and acetylation,
play crucial roles in the regulation of autophagy. Acetylation has emerged as an important …

[HTML][HTML] Post-translational modifications in liquid-liquid phase separation: a comprehensive review

J Li, M Zhang, W Ma, B Yang, H Lu, F Zhou… - Molecular …, 2022 - Springer
Liquid-liquid phase separation (LLPS) has received significant attention in recent biological
studies. It refers to a phenomenon that biomolecule exceeds the solubility, condensates and …

STALLION: a stacking-based ensemble learning framework for prokaryotic lysine acetylation site prediction

S Basith, G Lee, B Manavalan - Briefings in Bioinformatics, 2022 - academic.oup.com
Protein post-translational modification (PTM) is an important regulatory mechanism that
plays a key role in both normal and disease states. Acetylation on lysine residues is one of …

[HTML][HTML] Vorinostat (SAHA) and breast cancer: an overview

A Wawruszak, L Borkiewicz, E Okon, W Kukula-Koch… - Cancers, 2021 - mdpi.com
Simple Summary Breast cancer (BC) is the most frequent malignancy diagnosed in 2020
worldwide. Despite significant advances in BC therapy, its pathogenesis is still not fully …

[HTML][HTML] Lactylation: a passing fad or the future of posttranslational modification

Q Xin, H Wang, Q Li, S Liu, K Qu, C Liu, J Zhang - Inflammation, 2022 - Springer
Lactate is a glycolytic product and a significant energy source. Moreover, it regulates gene
transcription via lactylation of histones and non-histone proteins, ie, a novel posttranslational …

Proteomics of post-translational modifications in colorectal cancer: Discovery of new biomarkers

G Zhu, L Jin, W Sun, S Wang, N Liu - … et Biophysica Acta (BBA)-Reviews on …, 2022 - Elsevier
Colorectal cancer (CRC) is one of the costliest health problems and ranks second in cancer-
related mortality in developed countries. With the aid of proteomics, many protein …

[HTML][HTML] Fatty acid oxidation facilitates DNA double-strand break repair by promoting PARP1 acetylation

S Yang, S Hwang, B Kim, S Shin, M Kim… - Cell Death & …, 2023 - nature.com
DNA repair is a tightly coordinated stress response to DNA damage, which is critical for
preserving genome integrity. Accruing evidence suggests that metabolic pathways have …

[HTML][HTML] Multisite phosphorylation dictates selective E2-E3 pairing as revealed by Ubc8/UBE2H-GID/CTLH assemblies

J Chrustowicz, D Sherpa, J Li, CR Langlois… - Molecular Cell, 2024 - cell.com
Ubiquitylation is catalyzed by coordinated actions of E3 and E2 enzymes. Molecular
principles governing many important E3-E2 partnerships remain unknown, including those …

[HTML][HTML] Liquid-liquid phase separation of protein tau: An emerging process in Alzheimer's disease pathogenesis

H Ainani, N Bouchmaa, RB Mrid, R El Fatimy - Neurobiology of disease, 2023 - Elsevier
Metabolic reactions within cells occur in various isolated compartments with or without
borders, the latter being known as membrane-less organelles (MLOs). The MLOs show …