[PDF][PDF] Novel insight into RNA modifications in tumour immunity: Promising targets to prevent tumour immune escape
An immunosuppressive state is a typical feature of the tumour microenvironment. Despite
the dramatic success of immune checkpoint inhibitor (ICI) therapy in preventing tumour cell …
the dramatic success of immune checkpoint inhibitor (ICI) therapy in preventing tumour cell …
m6A-Atlas v2.0: updated resources for unraveling the N6-methyladenosine (m6A) epitranscriptome among multiple species
Abstract N 6-Methyladenosine (m6A) is one of the most abundant internal chemical
modifications on eukaryote mRNA and is involved in numerous essential molecular …
modifications on eukaryote mRNA and is involved in numerous essential molecular …
[HTML][HTML] m7GHub V2.0: an updated database for decoding the N7-methylguanosine (m7G) epitranscriptome
With recent progress in mapping N7-methylguanosine (m7G) RNA methylation sites, tens of
thousands of experimentally validated m7G sites have been discovered in various species …
thousands of experimentally validated m7G sites have been discovered in various species …
Evaluation of epitranscriptome-wide N6-methyladenosine differential analysis methods
RNA methylation has emerged recently as an active research domain to study post-
transcriptional alteration in gene expression regulation. Various types of RNA methylation …
transcriptional alteration in gene expression regulation. Various types of RNA methylation …
XGBoost framework with feature selection for the prediction of RNA N5-methylcytosine sites
5-methylcytosine (m5C) is indeed a critical post-transcriptional alteration that is widely
present in various kinds of RNAs and is crucial to the fundamental biological processes. By …
present in various kinds of RNAs and is crucial to the fundamental biological processes. By …
[HTML][HTML] Combined signature of N7-methylguanosine regulators with their related genes and the tumor microenvironment: a prognostic and therapeutic biomarker for …
T Li, Z Chen, Z Wang, J Lu, D Chen - Frontiers in Immunology, 2023 - frontiersin.org
Background Identifying predictive markers for breast cancer (BC) prognosis and
immunotherapeutic responses remains challenging. Recent findings indicate that N7 …
immunotherapeutic responses remains challenging. Recent findings indicate that N7 …
[HTML][HTML] Evaluation and development of deep neural networks for RNA 5-methyluridine classifications using autoBioSeqpy
L Yu, Y Zhang, L Xue, F Liu, R Jing, J Luo - Frontiers in Microbiology, 2023 - frontiersin.org
Post-transcriptionally RNA modifications, also known as the epitranscriptome, play crucial
roles in the regulation of gene expression during development. Recently, deep learning (DL) …
roles in the regulation of gene expression during development. Recently, deep learning (DL) …
[HTML][HTML] The hidden RNA code: implications of the RNA epitranscriptome in the context of viral infections
Emerging evidence highlights the multifaceted roles of the RNA epitranscriptome during
viral infections. By modulating the modification landscape of viral and host RNAs, viruses …
viral infections. By modulating the modification landscape of viral and host RNAs, viruses …
The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection
DJ Rigden, XM Fernández - Nucleic Acids Research, 2023 - academic.oup.com
Abstract The 2023 Nucleic Acids Research Database Issue contains 178 papers ranging
across biology and related fields. There are 90 papers reporting on new databases and 82 …
across biology and related fields. There are 90 papers reporting on new databases and 82 …
[HTML][HTML] m5U-GEPred: prediction of RNA 5-methyluridine sites based on sequence-derived and graph embedding features
5-Methyluridine (m 5 U) is one of the most common post-transcriptional RNA modifications,
which is involved in a variety of important biological processes and disease development …
which is involved in a variety of important biological processes and disease development …