Using the ACMG/AMP framework to capture evidence related to predicted and observed impact on splicing: Recommendations from the ClinGen SVI Splicing …

LC Walker, M de la Hoya, GAR Wiggins, A Lindy… - The American Journal of …, 2023 - cell.com
Summary The American College of Medical Genetics and Genomics (ACMG)/Association for
Molecular Pathology (AMP) framework for classifying variants uses six evidence categories …

Artificial Intelligence in Point-of-Care Biosensing: Challenges and Opportunities

CD Flynn, D Chang - Diagnostics, 2024 - mdpi.com
The integration of artificial intelligence (AI) into point-of-care (POC) biosensing has the
potential to revolutionize diagnostic methodologies by offering rapid, accurate, and …

Benchmarking splice variant prediction algorithms using massively parallel splicing assays

C Smith, JO Kitzman - Genome Biology, 2023 - Springer
Background Variants that disrupt mRNA splicing account for a sizable fraction of the
pathogenic burden in many genetic disorders, but identifying splice-disruptive variants …

Natural history of GM1 gangliosidosis—retrospective cohort study of 61 French patients from 1998 to 2019

D Laur, S Pichard, S Bekri, C Caillaud… - Journal of Inherited …, 2023 - Wiley Online Library
GM1 gangliosidosis is a rare lysosomal storage disorder associated with β‐galactosidase
enzyme deficiency. There are three types of GM1 gangliosidosis based on age of symptom …

Five-Years Review of RHCE Alleles Detected after Weak and/or Discrepant C Results in Southern France

P Pedini, L Filosa, N Bichel, C Picard, M Silvy… - Genes, 2022 - mdpi.com
Immunohematology laboratories are regularly facing transfusion issues due to serological
weaknesses. Altered (partial) RH antigens account for most of them. In some situations …

APOB CRISPR-Cas9 Engineering in Hypobetalipoproteinemia: A Promising Tool for Functional Studies of Novel Variants

X Vanhoye, A Janin, A Caillaud, A Rimbert… - International Journal of …, 2022 - mdpi.com
Hypobetalipoproteinemia is characterized by LDL-cholesterol and apolipoprotein B (apoB)
plasma levels below the fifth percentile for age and sex. Familial hypobetalipoproteinemia …

PDIVAS: Pathogenicity predictor for deep-intronic variants causing aberrant splicing

R Kurosawa, K Iida, M Ajiro, T Awaya, M Yamada… - BMC genomics, 2023 - Springer
Background Deep-intronic variants that alter RNA splicing were ineffectively evaluated in the
search for the cause of genetic diseases. Determination of such pathogenic variants from a …

Overview of the genetic causes of hereditary breast and ovarian cancer syndrome in a large French patient cohort

A Bouras, S Guidara, M Leone, A Buisson… - Cancers, 2023 - mdpi.com
Simple Summary Hereditary Breast and Ovarian Cancer syndrome (HBOC) is an inherited
trait that predisposes adults to an earlier onset of cancer than the general population. HBOC …

Predicting the impact of rare variants on RNA splicing in CAGI6

J Lord, CJ Oquendo, HA Wai, AGL Douglas… - Human Genetics, 2024 - Springer
Variants which disrupt splicing are a frequent cause of rare disease that have been under-
ascertained clinically. Accurate and efficient methods to predict a variant's impact on splicing …

Computational prediction of human deep intronic variation

P Barbosa, R Savisaar, M Carmo-Fonseca… - …, 2023 - academic.oup.com
Background The adoption of whole-genome sequencing in genetic screens has facilitated
the detection of genetic variation in the intronic regions of genes, far from annotated splice …