Fighting antibiotic resistance in hospital-acquired infections: current state and emerging technologies in disease prevention, diagnostics and therapy
E Avershina, V Shapovalova, G Shipulin - Frontiers in microbiology, 2021 - frontiersin.org
Rising antibiotic resistance is a global threat that is projected to cause more deaths than all
cancers combined by 2050. In this review, we set to summarize the current state of antibiotic …
cancers combined by 2050. In this review, we set to summarize the current state of antibiotic …
Rapid methods for antimicrobial resistance diagnostics
GD Kaprou, I Bergšpica, EA Alexa, A Alvarez-Ordóñez… - Antibiotics, 2021 - mdpi.com
Antimicrobial resistance (AMR) is one of the most challenging threats in public health; thus,
there is a growing demand for methods and technologies that enable rapid antimicrobial …
there is a growing demand for methods and technologies that enable rapid antimicrobial …
PLSDB: advancing a comprehensive database of bacterial plasmids
Plasmids are known to contain genes encoding for virulence factors and antibiotic
resistance mechanisms. Their relevance in metagenomic data processing is steadily …
resistance mechanisms. Their relevance in metagenomic data processing is steadily …
Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge
Background There is concern that the microbially rich activated sludge environment of
wastewater treatment plants (WWTPs) may contribute to the dissemination of antibiotic …
wastewater treatment plants (WWTPs) may contribute to the dissemination of antibiotic …
Antibiotic resistance in plant growth promoting bacteria: A comprehensive review and future perspectives to mitigate potential gene invasion risks
Plant growth-promoting bacteria (PGPB) are endowed with several attributes that can be
beneficial for host plants. They opened myriad doors toward green technology approach to …
beneficial for host plants. They opened myriad doors toward green technology approach to …
Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives
Antimicrobial resistance (AMR), defined as the ability of microorganisms to withstand
antimicrobial treatment, is responsible for millions of deaths annually. The rapid spread of …
antimicrobial treatment, is responsible for millions of deaths annually. The rapid spread of …
SERS nanowire chip and machine learning-enabled classification of wild-type and antibiotic-resistant bacteria at species and strain levels
Antimicrobial resistance (AMR) is a major health threat worldwide and the culture-based
bacterial detection methods are slow. Surface-enhanced Raman spectroscopy (SERS) can …
bacterial detection methods are slow. Surface-enhanced Raman spectroscopy (SERS) can …
BugSeq: a highly accurate cloud platform for long-read metagenomic analyses
J Fan, S Huang, SD Chorlton - BMC bioinformatics, 2021 - Springer
Background As the use of nanopore sequencing for metagenomic analysis increases, tools
capable of performing long-read taxonomic classification (ie. determining the composition of …
capable of performing long-read taxonomic classification (ie. determining the composition of …
Drug resistance and vaccine target surveillance of Plasmodium falciparum using nanopore sequencing in Ghana
ST Girgis, E Adika, FE Nenyewodey… - Nature …, 2023 - nature.com
Malaria results in over 600,000 deaths annually, with the highest burden of deaths in young
children living in sub-Saharan Africa. Molecular surveillance can provide important …
children living in sub-Saharan Africa. Molecular surveillance can provide important …
Rapid detection of bacterial pathogens and antimicrobial resistance genes in clinical urine samples with urinary tract infection by metagenomic nanopore sequencing
L Zhang, W Huang, S Zhang, Q Li, Y Wang… - Frontiers in …, 2022 - frontiersin.org
Urinary tract infections (UTIs) are among the most common acquired bacterial infections in
humans. The current gold standard method for identification of uropathogens in clinical …
humans. The current gold standard method for identification of uropathogens in clinical …