PhenoPro: a novel toolkit for assisting in the diagnosis of Mendelian disease

Z Li, F Zhang, Y Wang, Y Qiu, Y Wu, Y Lu, L Yang… - …, 2019 - academic.oup.com
Motivation Whole-exome sequencing (WES) is now being used in clinical practice for the
diagnosis of the causal genes of Mendelian diseases. In order to make the diagnosis …

[HTML][HTML] Prediction of Human Phenotype Ontology terms by means of hierarchical ensemble methods

M Notaro, M Schubach, PN Robinson, G Valentini - BMC bioinformatics, 2017 - Springer
Background The prediction of human gene–abnormal phenotype associations is a
fundamental step toward the discovery of novel genes associated with human disorders …

[HTML][HTML] Using mechanistic models for the clinical interpretation of complex genomic variation

M Peña-Chilet, M Esteban-Medina, MM Falco, K Rian… - Scientific reports, 2019 - nature.com
The sustained generation of genomic data in the last decade has increased the knowledge
on the causal mutations of a large number of diseases, especially for highly penetrant …

Long-term outcome of the survivors of infantile hypercalcaemia with CYP24A1 and SLC34A1 mutations

A Janiec, P Halat-Wolska, Ł Obrycki… - Nephrology Dialysis …, 2021 - academic.oup.com
Background Infantile hypercalcaemia (IH) is a vitamin D3 metabolism disorder. The
molecular basis for IH is biallelic mutations in the CYP24A1 or SLC34A1 gene. These …

Computational resources associating diseases with genotypes, phenotypes and exposures

W Zhang, H Zhang, H Yang, M Li, Z Xie… - Briefings in …, 2019 - academic.oup.com
The causes of a disease and its therapies are not only related to genotypes, but also
associated with other factors, including phenotypes, environmental exposures, drugs and …

[HTML][HTML] Measuring phenotype-phenotype similarity through the interactome

J Peng, W Hui, X Shang - BMC bioinformatics, 2018 - Springer
Background Recently, measuring phenotype similarity began to play an important role in
disease diagnosis. Researchers have begun to pay attention to develop phenotype …

[HTML][HTML] Transforming the study of organisms: Phenomic data models and knowledge bases

AE Thessen, RL Walls, L Vogt, J Singer… - PLoS computational …, 2020 - journals.plos.org
The rapidly decreasing cost of gene sequencing has resulted in a deluge of genomic data
from across the tree of life; however, outside a few model organism databases, genomic …

[HTML][HTML] GenIO: a phenotype-genotype analysis web server for clinical genomics of rare diseases

D Koile, M Cordoba, M de Sousa Serro… - BMC …, 2018 - Springer
Background GenIO is a novel web-server, designed to assist clinical genomics researchers
and medical doctors in the diagnostic process of rare genetic diseases. The tool identifies …

[HTML][HTML] Big data phenotyping in rare diseases: some ethical issues

N Hallowell, M Parker, C Nellåker - Genetics in Medicine, 2019 - nature.com
Phenotyping based on the analysis of photographic images is refining the categorization of
rare genetic disorders. 1 Through the development of facial recognition technology …

A Novel ANO5 Mutation Causing Gnathodiaphyseal Dysplasia With High Bone Turnover Osteosclerosis

T Rolvien, T Koehne, U Kornak… - Journal of bone and …, 2017 - academic.oup.com
Gnathodiaphyseal dysplasia (GDD) is a rare skeletal syndrome that involves an
osteopetrosis‐like sclerosis of the long bones and fibrous dysplasia–like cemento‐osseous …