Artificial intelligence in histopathology: enhancing cancer research and clinical oncology

A Shmatko, N Ghaffari Laleh, M Gerstung, JN Kather - Nature cancer, 2022 - nature.com
Artificial intelligence (AI) methods have multiplied our capabilities to extract quantitative
information from digital histopathology images. AI is expected to reduce workload for human …

Vision transformers in medical computer vision—A contemplative retrospection

A Parvaiz, MA Khalid, R Zafar, H Ameer, M Ali… - … Applications of Artificial …, 2023 - Elsevier
Abstract Vision Transformers (ViTs), with the magnificent potential to unravel the information
contained within images, have evolved as one of the most contemporary and dominant …

Benchmarking weakly-supervised deep learning pipelines for whole slide classification in computational pathology

NG Laleh, HS Muti, CML Loeffler, A Echle… - Medical image …, 2022 - Elsevier
Artificial intelligence (AI) can extract visual information from histopathological slides and
yield biological insight and clinical biomarkers. Whole slide images are cut into thousands of …

Lizard: a large-scale dataset for colonic nuclear instance segmentation and classification

S Graham, M Jahanifar, A Azam… - Proceedings of the …, 2021 - openaccess.thecvf.com
The development of deep segmentation models for computational pathology (CPath) can
help foster the investigation of interpretable morphological biomarkers. Yet, there is a major …

A comprehensive review of deep learning in colon cancer

I Pacal, D Karaboga, A Basturk, B Akay… - Computers in Biology …, 2020 - Elsevier
Deep learning has emerged as a leading machine learning tool in object detection and has
attracted attention with its achievements in progressing medical image analysis …

A survey on graph-based deep learning for computational histopathology

D Ahmedt-Aristizabal, MA Armin, S Denman… - … Medical Imaging and …, 2022 - Elsevier
With the remarkable success of representation learning for prediction problems, we have
witnessed a rapid expansion of the use of machine learning and deep learning for the …

Cgc-net: Cell graph convolutional network for grading of colorectal cancer histology images

Y Zhou, S Graham… - Proceedings of the …, 2019 - openaccess.thecvf.com
Colorectal cancer (CRC) grading is typically carried out by assessing the degree of gland
formation within histology images. To do this, it is important to consider the overall tissue …

[HTML][HTML] Development and validation of a weakly supervised deep learning framework to predict the status of molecular pathways and key mutations in colorectal …

M Bilal, SEA Raza, A Azam, S Graham… - The Lancet Digital …, 2021 - thelancet.com
Background Determining the status of molecular pathways and key mutations in colorectal
cancer is crucial for optimal therapeutic decision making. We therefore aimed to develop a …

[HTML][HTML] Hierarchical graph representations in digital pathology

P Pati, G Jaume, A Foncubierta-Rodriguez… - Medical image …, 2022 - Elsevier
Cancer diagnosis, prognosis, and therapy response predictions from tissue specimens
highly depend on the phenotype and topological distribution of constituting histological …

Artificial intelligence for digital and computational pathology

AH Song, G Jaume, DFK Williamson, MY Lu… - Nature Reviews …, 2023 - nature.com
Advances in digitizing tissue slides and the fast-paced progress in artificial intelligence,
including deep learning, have boosted the field of computational pathology. This field holds …