[HTML][HTML] The technological landscape and applications of single-cell multi-omics

A Baysoy, Z Bai, R Satija, R Fan - Nature Reviews Molecular Cell …, 2023 - nature.com
Single-cell multi-omics technologies and methods characterize cell states and activities by
simultaneously integrating various single-modality omics methods that profile the …

Characterizing cis-regulatory elements using single-cell epigenomics

S Preissl, KJ Gaulton, B Ren - Nature Reviews Genetics, 2023 - nature.com
Cell type-specific gene expression patterns and dynamics during development or in disease
are controlled by cis-regulatory elements (CREs), such as promoters and enhancers …

ISSAAC-seq enables sensitive and flexible multimodal profiling of chromatin accessibility and gene expression in single cells

W Xu, W Yang, Y Zhang, Y Chen, N Hong, Q Zhang… - Nature …, 2022 - nature.com
Joint profiling of chromatin accessibility and gene expression from the same single cell
provides critical information about cell types in a tissue and cell states during a dynamic …

Recent advances in single-cell sequencing technologies

L Wen, F Tang - Precision clinical medicine, 2022 - academic.oup.com
Single-cell omics sequencing was first achieved for the transcriptome in 2009, which was
followed by fast development of technologies for profiling the genome, DNA methylome, 3D …

[HTML][HTML] Advances in liquid biopsy technology and implications for pancreatic cancer

AG Raufi, MS May, MJ Hadfield, AA Seyhan… - International journal of …, 2023 - mdpi.com
Pancreatic cancer is a highly aggressive malignancy with a climbing incidence. The majority
of cases are detected late, with incurable locally advanced or metastatic disease. Even in …

[HTML][HTML] Advances in single-cell omics and multiomics for high-resolution molecular profiling

J Lim, C Park, M Kim, H Kim, J Kim… - Experimental & Molecular …, 2024 - nature.com
Single-cell omics technologies have revolutionized molecular profiling by providing high-
resolution insights into cellular heterogeneity and complexity. Traditional bulk omics …

GTAC enables parallel genotyping of multiple genomic loci with chromatin accessibility profiling in single cells

S Turkalj, NA Jakobsen, A Groom, M Metzner, SG Riva… - Cell Stem Cell, 2023 - cell.com
Understanding clonal evolution and cancer development requires experimental approaches
for characterizing the consequences of somatic mutations on gene regulation. However, no …

Progress in single-cell multimodal sequencing and multi-omics data integration

X Wang, X Wu, N Hong, W Jin - Biophysical Reviews, 2024 - Springer
With the rapid advance of single-cell sequencing technology, cell heterogeneity in various
biological processes was dissected at different omics levels. However, single-cell mono …

[HTML][HTML] Integrative insights and clinical applications of single-cell sequencing in cancer immunotherapy

Z Liu, H Li, Q Dang, S Weng, M Duo, J Lv… - Cellular and Molecular …, 2022 - Springer
Recently, immunotherapy has gained increasing popularity in oncology. Several
immunotherapies obtained remarkable clinical effects, but the efficacy varied, and only …

[HTML][HTML] GAGAM v1. 2: An improvement on peak labeling and genomic annotated gene activity matrix construction

L Martini, R Bardini, A Savino, S Di Carlo - Genes, 2022 - mdpi.com
Single-cell Assay for Transposase-Accessible Chromatin using sequencing (scATAC-seq) is
rapidly becoming a powerful technology for assessing the epigenetic landscape of …