Network diffusion promotes the integrative analysis of multiple omics

N Di Nanni, M Bersanelli, L Milanesi, E Mosca - Frontiers in genetics, 2020 - frontiersin.org
The development of integrative methods is one of the main challenges in bioinformatics.
Network-based methods for the analysis of multiple gene-centered datasets take into …

Aging mechanisms—A perspective mostly from Drosophila

A Tsurumi, WX Li - Advanced Genetics, 2020 - Wiley Online Library
A mechanistic understanding of the natural aging process, which is distinct from aging‐
related disease mechanisms, is essential for developing interventions to extend lifespan or …

[HTML][HTML] Multiomics analyses of cytokines, genes, miRNA, and regulatory networks in human mesenchymal stem cells expanded in stirred microcarrier-spinner …

ATL Lam, AP Lee, P Jayaraman, KY Tan… - Stem Cell Research, 2021 - Elsevier
Mesenchymal stem cells (MSCs) are of great clinical interest as a form of allogenic therapy
due to their excellent regenerative and immunomodulatory effects for various therapeutic …

Towards high throughput and high information coverage: advanced single-cell mass spectrometric techniques

S Xu, C Yang, X Yan, H Liu - Analytical and Bioanalytical Chemistry, 2022 - Springer
Mass spectrometry (MS) is attractive for single-cell analysis because of its high sensitivity,
rich information, and large dynamic ranges, especially for the single-cell metabolome and …

Translational Bioinformatics Applied to the study of Complex diseases

MC Casotti, DD Meira, LNR Alves, BGO Bessa… - Genes, 2023 - mdpi.com
Translational Bioinformatics (TBI) is defined as the union of translational medicine and
bioinformatics. It emerges as a major advance in science and technology by covering …

The application of single-cell RNA sequencing in mammalian meiosis studies

Y Peng, H Qiao - Frontiers in cell and developmental biology, 2021 - frontiersin.org
Meiosis is a cellular division process that produces gametes for sexual reproduction.
Disruption of complex events throughout meiosis, such as synapsis and homologous …

Unraveling heterogeneity in transcriptome and its regulation through single-cell multi-omics technologies

QR Xing, NO Cipta, K Hamashima, YC Liou… - Frontiers in …, 2020 - frontiersin.org
Cellular heterogeneity plays a pivotal role in tissue homeostasis and the disease
development of multicellular organisms. To deconstruct the heterogeneity, a multitude of …

Paradigm shift required for translational research on the brain

JH Yoon, D Lee, C Lee, E Cho, S Lee… - … & Molecular Medicine, 2024 - nature.com
Biomedical research on the brain has led to many discoveries and developments, such as
understanding human consciousness and the mind and overcoming brain diseases …

Advanced single-cell technologies to guide the development of bioengineered lungs

H Wanczyk, T Jensen, DJ Weiss… - American Journal of …, 2021 - journals.physiology.org
Lung transplantation remains the only viable option for individuals suffering from end-stage
lung failure. However, a number of current limitations exist including a continuing shortage …

Physiological roles of antisense RNAs in prokaryotes

M Lejars, A Kobayashi, E Hajnsdorf - Biochimie, 2019 - Elsevier
Prokaryotes encounter constant and often brutal modifications to their environment. In order
to survive, they need to maintain fitness, which includes adapting their protein expression …