Ancient exapted transposable elements promote nuclear enrichment of human long noncoding RNAs

J Carlevaro-Fita, T Polidori, M Das, C Navarro… - Genome …, 2019 - genome.cshlp.org
The sequence domains underlying long noncoding RNA (lncRNA) activities, including their
characteristic nuclear enrichment, remain largely unknown. It has been proposed that these …

Long noncoding RNA GM12371 acts as a transcriptional regulator of synapse function

BL Raveendra, S Swarnkar… - Proceedings of the …, 2018 - National Acad Sciences
Despite the growing evidence suggesting that long noncoding RNAs (lncRNAs) are critical
regulators of several biological processes, their functions in the nervous system remain …

Nuclear retention of mRNAs–quality control, gene regulation and human disease

M Wegener, M Müller-McNicoll - Seminars in Cell & Developmental …, 2018 - Elsevier
Nuclear retention of incompletely spliced or mature mRNAs emerges as a novel, previously
underappreciated layer of gene regulation, which enables the cell to rapidly respond to …

Surveillance-ready transcription: nuclear RNA decay as a default fate

S Bresson, D Tollervey - Open biology, 2018 - royalsocietypublishing.org
Eukaryotic cells synthesize enormous quantities of RNA from diverse classes, most of which
are subject to extensive processing. These processes are inherently error-prone, and cells …

Long noncoding rnas in taxane resistance of breast cancer

H Chen, M Zhang, Y Deng - International Journal of Molecular Sciences, 2023 - mdpi.com
Breast cancer is a common cancer in women and a leading cause of mortality. With the early
diagnosis and development of therapeutic drugs, the prognosis of breast cancer has …

Deciphering human ribonucleoprotein regulatory networks

N Mukherjee, HH Wessels, S Lebedeva… - Nucleic acids …, 2019 - academic.oup.com
RNA-binding proteins (RBPs) control and coordinate each stage in the life cycle of RNAs.
Although in vivo binding sites of RBPs can now be determined genome-wide, most studies …

FMRP links optimal codons to mRNA stability in neurons

H Shu, E Donnard, B Liu, S Jung… - Proceedings of the …, 2020 - National Acad Sciences
Fragile X syndrome (FXS) is caused by inactivation of the FMR1 gene and loss of encoded
FMRP, an RNA binding protein that represses translation of some of its target transcripts …

Dynamics of transcriptional and post-transcriptional regulation

M Furlan, S de Pretis, M Pelizzola - Briefings in Bioinformatics, 2021 - academic.oup.com
Despite gene expression programs being notoriously complex, RNA abundance is usually
assumed as a proxy for transcriptional activity. Recently developed approaches, able to …

Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast

SR Atkinson, S Marguerat, DA Bitton… - Rna, 2018 - rnajournal.cshlp.org
Long noncoding RNAs (lncRNAs), which are longer than 200 nucleotides but often unstable,
contribute a substantial and diverse portion to pervasive noncoding transcriptomes. Most …

Functional roles of long non-coding RNAs in motor neuron development and disease

KW Chen, JA Chen - Journal of Biomedical Science, 2020 - Springer
Long non-coding RNAs (lncRNAs) have gained increasing attention as they exhibit highly
tissue-and cell-type specific expression patterns. LncRNAs are highly expressed in the …