3D spatial genome organization in the nervous system: From development and plasticity to disease

Y Fujita, SR Pather, G Ming, H Song - Neuron, 2022 - cell.com
Chromatin is organized into multiscale three-dimensional structures, including chromosome
territories, A/B compartments, topologically associating domains, and chromatin loops. This …

Temperature regulation of plant hormone signaling during stress and development

CDM Castroverde, D Dina - Journal of experimental botany, 2021 - academic.oup.com
Global climate change has broad-ranging impacts on the natural environment and human
civilization. Increasing average temperatures along with more frequent heat waves …

The evolution, evolvability and engineering of gene regulatory DNA

ED Vaishnav, CG de Boer, J Molinet, M Yassour, L Fan… - Nature, 2022 - nature.com
Mutations in non-coding regulatory DNA sequences can alter gene expression, organismal
phenotype and fitness–. Constructing complete fitness landscapes, in which DNA …

[HTML][HTML] Multi-omic insights into Parkinson's Disease: From genetic associations to functional mechanisms

BM Schilder, E Navarro, T Raj - Neurobiology of disease, 2022 - Elsevier
Abstract Genome-Wide Association Studies (GWAS) have elucidated the genetic
components of Parkinson's Disease (PD). However, because the vast majority of GWAS …

[HTML][HTML] Probing neural circuit mechanisms in Alzheimer's disease using novel technologies

SF Grieco, TC Holmes, X Xu - Molecular Psychiatry, 2023 - nature.com
The study of Alzheimer's Disease (AD) has traditionally focused on neuropathological
mechanisms that has guided therapies that attenuate neuropathological features. A new …

[HTML][HTML] Stable continual learning through structured multiscale plasticity manifolds

P Mishra, R Narayanan - Current opinion in neurobiology, 2021 - Elsevier
Biological plasticity is ubiquitous. How does the brain navigate this complex plasticity space,
where any component can seemingly change, in adapting to an ever-changing …

[HTML][HTML] Revolutionizing disease modeling: the emergence of organoids in cellular systems

R Silva-Pedrosa, AJ Salgado, PE Ferreira - Cells, 2023 - mdpi.com
Cellular models have created opportunities to explore the characteristics of human diseases
through well-established protocols, while avoiding the ethical restrictions associated with …

[HTML][HTML] Synaptic plasticity in memristive artificial synapses and their robustness against noisy inputs

N Du, X Zhao, Z Chen, B Choubey… - Frontiers in …, 2021 - frontiersin.org
Emerging brain-inspired neuromorphic computing paradigms require devices that can
emulate the complete functionality of biological synapses upon different neuronal activities …

[PDF][PDF] Multiple genes in a single GWAS risk locus synergistically mediate aberrant synaptic development and function in human neurons

S Zhang, H Zhang, MP Forrest, Y Zhou, X Sun… - Cell genomics, 2023 - cell.com
The mechanistic tie between genome-wide association study (GWAS)-implicated risk
variants and disease-relevant cellular phenotypes remains largely unknown. Here, using …

Current and future perspectives of noncoding RNAs in brain function and neuropsychiatric disease

EJ Kyzar, JP Bohnsack, SC Pandey - Biological Psychiatry, 2022 - Elsevier
Noncoding RNAs (ncRNAs) represent the majority of the transcriptome and play important
roles in regulating neuronal functions. ncRNAs are exceptionally diverse in both structure …