Principles and methods for transferring polygenic risk scores across global populations

L Kachuri, N Chatterjee, J Hirbo, DJ Schaid… - Nature Reviews …, 2024 - nature.com
Polygenic risk scores (PRSs) summarize the genetic predisposition of a complex human trait
or disease and may become a valuable tool for advancing precision medicine. However …

Aspiring toward equitable benefits from genomic advances to individuals of ancestrally diverse backgrounds

Y Wang, Y He, Y Shi, DC Qian, KJ Gray, R Winn… - The American Journal of …, 2024 - cell.com
Advancements in genomic technologies have shown remarkable promise for improving
health trajectories. The Human Genome Project has catalyzed the integration of genomic …

MESuSiE enables scalable and powerful multi-ancestry fine-mapping of causal variants in genome-wide association studies

B Gao, X Zhou - Nature Genetics, 2024 - nature.com
Fine-mapping in genome-wide association studies attempts to identify causal SNPs from a
set of candidate SNPs in a local genomic region of interest and is commonly performed in …

Shared genetic architectures of educational attainment in East Asian and European populations

TT Chen, J Kim, M Lam, YF Chuang, YL Chiu… - Nature Human …, 2024 - nature.com
Educational attainment (EduYears), a heritable trait often used as a proxy for cognitive
ability, is associated with various health and social outcomes. Previous genome-wide …

[HTML][HTML] Fast and flexible joint fine-mapping of multiple traits via the Sum of Single Effects model

Y Zou, P Carbonetto, D Xie, G Wang, M Stephens - bioRxiv, 2023 - ncbi.nlm.nih.gov
We introduce mvSuSiE, a multi-trait fine-mapping method for identifying putative causal
variants from genetic association data (individual-level or summary data). mvSuSiE learns …

Genetic control of DNA methylation is largely shared across European and East Asian populations

AA Hatton, FF Cheng, T Lin, RJ Shen, J Chen… - Nature …, 2024 - nature.com
DNA methylation is an ideal trait to study the extent of the shared genetic control across
ancestries, effectively providing hundreds of thousands of model molecular traits with large …

Human height: a model common complex trait

M Conery, SFA Grant - Annals of human biology, 2023 - Taylor & Francis
Context Like other complex phenotypes, human height reflects a combination of
environmental and genetic factors, but is notable for being exceptionally easy to measure …

Genetic association analysis of human median voice pitch identifies a common locus for tonal and non-tonal languages

Y Di, J Mefford, E Rahmani, J Wang, V Ravi… - Communications …, 2024 - nature.com
The genetic influence on human vocal pitch in tonal and non-tonal languages remains
largely unknown. In tonal languages, such as Mandarin Chinese, pitch changes differentiate …

SharePro: an accurate and efficient genetic colocalization method accounting for multiple causal signals

W Zhang, T Lu, R Sladek, Y Li, H Najafabadi… - …, 2024 - academic.oup.com
Motivation Colocalization analysis is commonly used to assess whether two or more traits
share the same genetic signals identified in genome-wide association studies (GWAS), and …

Whole genome association testing in 333,100 individuals across three biobanks identifies rare non-coding single variant and genomic aggregate associations with …

G Hawkes, RN Beaumont, Z Li, R Mandla, X Li… - bioRxiv, 2023 - biorxiv.org
The role of rare non-coding variation in complex human phenotypes is still largely unknown.
To elucidate the impact of rare variants in regulatory elements, we performed a whole …