Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex

S Dong, H Li, M Wang, N Rasheed, B Zou, X Gao… - Cell Research, 2023 - nature.com
In Saccharomyces cerevisiae, cryptic transcription at the coding region is prevented by the
activity of Sin3 histone deacetylase (HDAC) complex Rpd3S, which is carried by the …

Understanding histone H3 lysine 36 methylation and its deregulation in disease

J Li, JH Ahn, GG Wang - Cellular and Molecular Life Sciences, 2019 - Springer
Methylation of histone H3 lysine 36 (H3K36) plays crucial roles in the partitioning of
chromatin to distinctive domains and the regulation of a wide range of biological processes …

How to slow down the ticking clock: age-associated epigenetic alterations and related interventions to extend life span

AM Galow, S Peleg - Cells, 2022 - mdpi.com
Epigenetic alterations pose one major hallmark of organismal aging. Here, we provide an
overview on recent findings describing the epigenetic changes that arise during aging and …

Genomic instability and epigenetic changes during aging

L López-Gil, A Pascual-Ahuir, M Proft - International Journal of Molecular …, 2023 - mdpi.com
Aging is considered the deterioration of physiological functions along with an increased
mortality rate. This scientific review focuses on the central importance of genomic instability …

Tug of war: adding and removing histone lysine methylation in Arabidopsis

J Xiao, US Lee, D Wagner - Current opinion in plant biology, 2016 - Elsevier
Highlights•Genome wide distribution and function of H3K4, K27, K36me in plant and
animal.•Summary of histone lysine methylation writer, eraser and reader in plant and …

Cellular senescence as the causal nexus of aging

N Bhatia-Dey, RR Kanherkar, SE Stair… - Frontiers in …, 2016 - frontiersin.org
In this paper we present cellular senescence as the ultimate driver of the aging process, as a
“causal nexus” that bridges microscopic subcellular damage with the phenotypic …

Yeast as a tool to identify anti-aging compounds

A Zimmermann, S Hofer, T Pendl, K Kainz… - FEMS yeast …, 2018 - academic.oup.com
In the search for interventions against aging and age-related diseases, biological screening
platforms are indispensable tools to identify anti-aging compounds among large substance …

Alternative promoters in CpG depleted regions are prevalently associated with epigenetic misregulation of liver cancer transcriptomes

C Nepal, JB Andersen - Nature Communications, 2023 - nature.com
Transcriptional regulation is commonly governed by alternative promoters. However, the
regulatory architecture in alternative and reference promoters, and how they differ, remains …

Methylation across the central dogma in health and diseases: new therapeutic strategies

R Liu, E Zhao, H Yu, C Yuan, MN Abbas… - Signal Transduction and …, 2023 - nature.com
The proper transfer of genetic information from DNA to RNA to protein is essential for cell-
fate control, development, and health. Methylation of DNA, RNAs, histones, and non-histone …

Shaping the cellular landscape with Set2/SETD2 methylation

SL McDaniel, BD Strahl - Cellular and Molecular Life Sciences, 2017 - Springer
Chromatin structure is a major barrier to gene transcription that must be disrupted and re-set
during each round of transcription. Central to this process is the Set2/SETD2 …