Interpreting and integrating big data in non-coding RNA research

S Cantarella, E Di Nisio, D Carnevali… - Emerging Topics in …, 2019 - portlandpress.com
In the last two decades, we have witnessed an impressive crescendo of non-coding RNA
studies, due to both the development of high-throughput RNA-sequencing strategies and an …

[PDF][PDF] Multiple Viral microRNAs Regulate Interferon Release and Signaling Early during

M Bouvet, S Voigt, T Tagawa - mBio, 12 (2), 2021 - scholar.archive.org
ABSTRACT Epstein-Barr virus (EBV), a human herpesvirus, encodes 44 microRNAs
(miRNAs), which regulate many genes with various functions in EBV-infected cells. Multiple …

PAR-CLIP: A Genomic Technique to Dissect RNA-Protein Interactions

T Dutka, AA Sarshad, M Hafner - … for Genetic Experimental Designs in High …, 2016 - Springer
RNA-protein interactions are central to cellular homeostasis and control every aspect of
RNA metabolism in the cell. A variety of in vitro and in vivo techniques have been developed …

Discriminative learning for probabilistic sequence analysis

J Maaskola - 2015 - refubium.fu-berlin.de
Die Mustersuche in Sequenzdaten ist ein Standardproblem der Bioinformatik, der
Anwendung von Rechenmethoden in der Biologie. Klassische Verfahren der Mustersuche …

[PDF][PDF] RNAi AND miRNA PATHWAYS IN PLANTS I–MOLECULAR MECHANISMS

I Plants - Introduction to RNAi and miRNA pathways, 2020 - dspace.cuni.cz
ABSTRACT RNA silencing denotes sequence-specific repression mediated by small RNAs.
It includes post-transcriptional silencing mechanisms such as RNA interference (RNAi) and …

[PDF][PDF] interactions to elucidate RNA regulatory programs

MM Hannigan, LL Zagore, DD Licatalosi - journal.hep.com.cn
Background: Our understanding of post-transcriptional gene regulation has increased
exponentially with the development of robust methods to define protein-RNA interactions …

[PDF][PDF] MiRNAs ARE POSTTRANSCRIPTIONAL REGULATORS OF GENE EXPRESSION

S Grosswendt, N Rajewsky - Essentials of Noncoding RNA in … - researchgate.net
Posttranscriptional gene regulation is important for all stages of the life of a (messenger)
RNA molecule, including splicing, nuclear/cytoplasmic export/import, transcript stability, as …

[PDF][PDF] Bioinformatics analysis of HPV associated host microRNA functions and identification of viral microRNA

K Qian - University of Helsinki, 2013 - helda.helsinki.fi
Human papillomaviruses (HPVs) form a large family of double stranded DNA (dsDNA)
viruses, some types of which are the major causes of cervical cancer. HPV 16 is widely …

[PDF][PDF] A computational approach to identify long non-coding RNAs acting as microRNA sponges

AA Karavangeli - 2019 - pergamos.lib.uoa.gr
Long non-coding RNAs (lncRNAs) are transcribed non-coding RNAs (ncRNAs) that are
more than 200 nucleotides long. Among their reported functions, their ability to act as …

[PDF][PDF] EBV and Apoptosis

L Fitzsimmons, GL Kelly - pure-oai.bham.ac.uk
Epstein–Barr virus (EBV) was first discovered in cells from a patient with Burkitt lymphoma
(BL), and is now known to be a contributory factor in 1–2% of all cancers, for which there are …