Interactions between bacterial and phage communities in natural environments
We commonly acknowledge that bacterial viruses (phages) shape the composition and
evolution of bacterial communities in nature and therefore have important roles in ecosystem …
evolution of bacterial communities in nature and therefore have important roles in ecosystem …
The human virome: assembly, composition and host interactions
G Liang, FD Bushman - Nature Reviews Microbiology, 2021 - nature.com
The human body hosts vast microbial communities, termed the microbiome. Less well
known is the fact that the human body also hosts vast numbers of different viruses …
known is the fact that the human body also hosts vast numbers of different viruses …
Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee
This article summarises the activities of the Bacterial Viruses Subcommittee of the
International Committee on Taxonomy of Viruses for the period of March 2021− March 2022 …
International Committee on Taxonomy of Viruses for the period of March 2021− March 2022 …
iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
The extraordinary diversity of viruses infecting bacteria and archaea is now primarily studied
through metagenomics. While metagenomes enable high-throughput exploration of the viral …
through metagenomics. While metagenomes enable high-throughput exploration of the viral …
Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
Bacteriophages have important roles in the ecology of the human gut microbiome but are
under-represented in reference databases. To address this problem, we assembled the …
under-represented in reference databases. To address this problem, we assembled the …
Gut microbiome, liver immunology, and liver diseases
R Wang, R Tang, B Li, X Ma, B Schnabl… - Cellular & molecular …, 2021 - nature.com
The gut microbiota is a complex and plastic consortium of microorganisms that are intricately
connected with human physiology. The liver is a central immunological organ that is …
connected with human physiology. The liver is a central immunological organ that is …
The human gut virome is highly diverse, stable, and individual specific
The human gut contains a vast array of viruses, mostly bacteriophages. The majority remain
uncharacterized, and their roles in shaping the gut microbiome and in impacting on human …
uncharacterized, and their roles in shaping the gut microbiome and in impacting on human …
[HTML][HTML] Whole-virome analysis sheds light on viral dark matter in inflammatory bowel disease
The human gut virome is thought to significantly impact the microbiome and human health.
However, most virome analyses have been performed on a limited fraction of known viruses …
However, most virome analyses have been performed on a limited fraction of known viruses …
High-throughput, single-microbe genomics with strain resolution, applied to a human gut microbiome
W Zheng, S Zhao, Y Yin, H Zhang, DM Needham… - Science, 2022 - science.org
Characterizing complex microbial communities with single-cell resolution has been a long-
standing goal of microbiology. We present Microbe-seq, a high-throughput method that …
standing goal of microbiology. We present Microbe-seq, a high-throughput method that …
Fecal pollution can explain antibiotic resistance gene abundances in anthropogenically impacted environments
Discharge of treated sewage leads to release of antibiotic resistant bacteria, resistance
genes and antibiotic residues to the environment. However, it is unclear whether increased …
genes and antibiotic residues to the environment. However, it is unclear whether increased …