Molecular subtyping of cancer: current status and moving toward clinical applications

L Zhao, VHF Lee, MK Ng, H Yan… - Briefings in …, 2019 - academic.oup.com
Cancer is a collection of genetic diseases, with large phenotypic differences and genetic
heterogeneity between different types of cancers and even within the same cancer type …

A comprehensive review on deep synergistic drug prediction techniques for cancer

V Kumar, N Dogra - Archives of Computational Methods in Engineering, 2022 - Springer
Drug combination therapies are successfully used in the treatment of cancer disease. The
synergistic drug combinations not only increase the drug efficacy, but also reduce the drug …

MERAV: a tool for comparing gene expression across human tissues and cell types

YD Shaul, B Yuan, P Thiru, A Nutter-Upham… - Nucleic acids …, 2016 - academic.oup.com
The oncogenic transformation of normal cells into malignant, rapidly proliferating cells
requires major alterations in cell physiology. For example, the transformed cells remodel …

New functional signatures for understanding melanoma biology from tumor cell lineage-specific analysis

F Rambow, B Job, V Petit, F Gesbert, V Delmas… - Cell reports, 2015 - cell.com
Molecular signatures specific to particular tumor types are required to design treatments for
resistant tumors. However, it remains unclear whether tumors and corresponding cell lines …

High content screening characterization of head and neck squamous cell carcinoma multicellular tumor spheroid cultures generated in 384-well ultra-low attachment …

SJ Kochanek, DA Close, PA Johnston - ASSAY and Drug …, 2019 - liebertpub.com
Multicellular tumor spheroid (MCTS) cultures represent more physiologically relevant in vitro
cell tumor models that recapitulate the microenvironments and cell–cell or cell–extracellular …

[HTML][HTML] Detection and impact of hypoxic regions in multicellular tumor spheroid cultures formed by head and neck squamous cell carcinoma cells lines

DA Close, PA Johnston - SLAS Discovery, 2023 - Elsevier
In solid tumors like head and neck cancer (HNC), chronic and acute hypoxia have serious
adverse clinical consequences including poorer overall patient prognosis, enhanced …

High-content screening comparison of cancer drug accumulation and distribution in two-dimensional and three-dimensional culture models of head and neck cancer

F Shan, DA Close, DP Camarco… - Assay and drug …, 2018 - liebertpub.com
High cancer drug development attrition rates have provoked considerable debate about
whether the two-dimensional tumor growth inhibition high-throughput screening assays …

Implementation of the NCI-60 human tumor cell line panel to screen 2260 cancer drug combinations to generate> 3 million data points used to populate a large matrix …

DA Close, AX Wang, SJ Kochanek… - … Life Sciences R&D, 2019 - journals.sagepub.com
Animal and clinical studies demonstrate that cancer drug combinations (DCs) are more
effective than single agents. However, it is difficult to predict which DCs will be more …

Integrated analysis identified core signal pathways and hypoxic characteristics of human glioblastoma

Y Gao, E Zhang, B Liu, K Zhou, S He… - Journal of Cellular …, 2019 - Wiley Online Library
As a hallmark for glioblastoma (GBM), high heterogeneity causes a variety of phenotypes
and therapeutic responses among GBM patients, and it contributes to treatment failure …

Performance evaluation of drug synergy datasets using computational intelligence approaches

P Rani, K Dutta, V Kumar - Multimedia Tools and Applications, 2024 - Springer
Drug synergy has become a promising approach for malignant diseases. This approach can
increase therapeutic efficacy, reduce toxicity, and overcome drug resistance compared with …