[HTML][HTML] Single-cell and spatial transcriptomics: deciphering brain complexity in health and disease

M Piwecka, N Rajewsky, A Rybak-Wolf - Nature Reviews Neurology, 2023 - nature.com
In the past decade, single-cell technologies have proliferated and improved from their
technically challenging beginnings to become common laboratory methods capable of …

A reference cell tree will serve science better than a reference cell atlas

S Domcke, J Shendure - Cell, 2023 - cell.com
Single-cell biology is facing a crisis of sorts. Vast numbers of single-cell molecular profiles
are being generated, clustered and annotated. However, this is overwhelmingly ad hoc, and …

[HTML][HTML] A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain

Z Yao, CTJ van Velthoven, M Kunst, M Zhang… - Nature, 2023 - nature.com
The mammalian brain consists of millions to billions of cells that are organized into many cell
types with specific spatial distribution patterns and structural and functional properties …

[HTML][HTML] A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation

Z Yao, CTJ Van Velthoven, TN Nguyen, J Goldy… - Cell, 2021 - cell.com
The isocortex and hippocampal formation (HPF) in the mammalian brain play critical roles in
perception, cognition, emotion, and learning. We profiled∼ 1.3 million cells covering the …

[HTML][HTML] A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge… - Nature, 2021 - nature.com
Single-cell transcriptomics can provide quantitative molecular signatures for large, unbiased
samples of the diverse cell types in the brain,–. With the proliferation of multi-omics datasets …

[HTML][HTML] The development and evolution of inhibitory neurons in primate cerebrum

MT Schmitz, K Sandoval, CP Chen, MA Mostajo-Radji… - Nature, 2022 - nature.com
Neuroanatomists have long speculated that expanded primate brains contain an increased
morphological diversity of inhibitory neurons (INs), and recent studies have identified …

[HTML][HTML] Cell type ontologies of the Human Cell Atlas

D Osumi-Sutherland, C Xu, M Keays, AP Levine… - Nature cell …, 2021 - nature.com
Massive single-cell profiling efforts have accelerated our discovery of the cellular
composition of the human body while at the same time raising the need to formalize this new …

[HTML][HTML] Divergent single cell transcriptome and epigenome alterations in ALS and FTD patients with C9orf72 mutation

J Li, MK Jaiswal, JF Chien, A Kozlenkov, J Jung… - Nature …, 2023 - nature.com
A repeat expansion in the C9orf72 (C9) gene is the most common genetic cause of
amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). Here we investigate …

A functional cellular framework for sex and estrous cycle-dependent gene expression and behavior

JR Knoedler, S Inoue, DW Bayless, T Yang, A Tantry… - Cell, 2022 - cell.com
Sex hormones exert a profound influence on gendered behaviors. How individual sex
hormone-responsive neuronal populations regulate diverse sex-typical behaviors is unclear …

[HTML][HTML] Anatomical structures, cell types and biomarkers of the Human Reference Atlas

K Börner, SA Teichmann, EM Quardokus, JC Gee… - Nature cell …, 2021 - nature.com
Abstract The Human Reference Atlas (HRA) aims to map all of the cells of the human body
to advance biomedical research and clinical practice. This Perspective presents …