[HTML][HTML] The role of chromatin during transcription

B Li, M Carey, JL Workman - Cell, 2007 - cell.com
Chromatin structure imposes significant obstacles on all aspects of transcription that are
mediated by RNA polymerase II. The dynamics of chromatin structure are tightly regulated …

Nucleosome positioning and gene regulation: advances through genomics

C Jiang, BF Pugh - Nature Reviews Genetics, 2009 - nature.com
Knowing the precise locations of nucleosomes in a genome is key to understanding how
genes are regulated. Recent'next generation'ChIP–chip and ChIP–Seq technologies have …

Determinants and dynamics of genome accessibility

O Bell, VK Tiwari, NH Thomä, D Schübeler - Nature Reviews Genetics, 2011 - nature.com
In eukaryotes, all DNA-templated reactions occur in the context of chromatin. Nucleosome
packaging inherently restricts DNA accessibility for regulatory proteins but also provides an …

An atomic model of the interferon-β enhanceosome

D Panne, T Maniatis, SC Harrison - Cell, 2007 - cell.com
Transcriptional activation of the interferon-β (IFN-β) gene requires assembly of an
enhanceosome containing ATF-2/c-Jun, IRF-3/IRF-7, and NFκB. These factors bind …

Chromatin and transcription in yeast

OJ Rando, F Winston - Genetics, 2012 - academic.oup.com
Understanding the mechanisms by which chromatin structure controls eukaryotic
transcription has been an intense area of investigation for the past 25 years. Many of the key …

KRAB–zinc finger proteins and KAP1 can mediate long-range transcriptional repression through heterochromatin spreading

AC Groner, S Meylan, A Ciuffi, N Zangger… - PLoS …, 2010 - journals.plos.org
Krüppel-associated box domain-zinc finger proteins (KRAB–ZFPs) are tetrapod-specific
transcriptional repressors encoded in the hundreds by the human genome. In order to …

Good cop, bad cop: the different faces of NF-κB

ND Perkins, TD Gilmore - Cell Death & Differentiation, 2006 - nature.com
Complexes formed from the nuclear factor κB (NF-κB) family of transcription factors are
ubiquitously expressed and are induced by a diverse array of stimuli. This results in their …

Deciphering the transcriptional histone acetylation code for a human gene

T Agalioti, G Chen, D Thanos - Cell, 2002 - cell.com
We report the results of experiments designed to test the histone code hypothesis. We found
that only a small subset of lysines in histones H4 and H3 are acetylated in vivo by the GCN5 …

Triggering the innate antiviral response through IRF-3 activation

J Hiscott - Journal of Biological Chemistry, 2007 - ASBMB
Rapid induction of type I interferon (IFN) expression is a central event in the establishment of
the innate immune response against viral infection and requires the activation of multiple …

Role of histone acetylation in the control of gene expression

L Verdone, M Caserta, ED Mauro - Biochemistry and Cell …, 2005 - cdnsciencepub.com
Histone proteins play structural and functional roles in all nuclear processes. They undergo
different types of covalent modifications, defined in their ensemble as epigenetic because …