The single-cell sequencing: new developments and medical applications

X Tang, Y Huang, J Lei, H Luo, X Zhu - Cell & bioscience, 2019 - Springer
Single-cell sequencing technologies can be used to detect the genome, transcriptome and
other multi-omics of single cells. They can show the differences and evolutionary …

Single-cell RNA sequencing in cardiovascular development, disease and medicine

DT Paik, S Cho, L Tian, HY Chang… - Nature Reviews Cardiology, 2020 - nature.com
Advances in single-cell RNA sequencing (scRNA-seq) technologies in the past 10 years
have had a transformative effect on biomedical research, enabling the profiling and analysis …

A human cell atlas of fetal gene expression

J Cao, DR O'day, HA Pliner, PD Kingsley, M Deng… - Science, 2020 - science.org
INTRODUCTION A reference atlas of human cell types is a major goal for the field. Here, we
set out to generate single-cell atlases of both gene expression (this study) and chromatin …

Spatiotemporal immune zonation of the human kidney

BJ Stewart, JR Ferdinand, MD Young, TJ Mitchell… - Science, 2019 - science.org
Tissue-resident immune cells are important for organ homeostasis and defense. The
epithelium may contribute to these functions directly or by cross-talk with immune cells. We …

Generation of human PSC-derived kidney organoids with patterned nephron segments and a de novo vascular network

JH Low, P Li, EGY Chew, B Zhou, K Suzuki, T Zhang… - Cell stem cell, 2019 - cell.com
Human pluripotent stem cell-derived kidney organoids recapitulate developmental
processes and tissue architecture, but intrinsic limitations, such as lack of vasculature and …

Single-cell profiling of AKI in a murine model reveals novel transcriptional signatures, profibrotic phenotype, and epithelial-to-stromal crosstalk

V Rudman-Melnick, M Adam, A Potter… - Journal of the …, 2020 - journals.lww.com
Background Current management of AKI, a potentially fatal disorder that can also initiate or
exacerbate CKD, is merely supportive. Therefore, deeper understanding of the molecular …

Human kidney organoids: progress and remaining challenges

R Nishinakamura - Nature Reviews Nephrology, 2019 - nature.com
Kidney organoids are regarded as important tools with which to study the development of
the normal and diseased human kidney. Since the first reports of human pluripotent stem …

Single cell census of human kidney organoids shows reproducibility and diminished off-target cells after transplantation

A Subramanian, EH Sidhom, M Emani… - Nature …, 2019 - nature.com
Human iPSC-derived kidney organoids have the potential to revolutionize discovery, but
assessing their consistency and reproducibility across iPSC lines, and reducing the …

Single cell atlas for 11 non-model mammals, reptiles and birds

D Chen, J Sun, J Zhu, X Ding, T Lan, X Wang… - Nature …, 2021 - nature.com
The availability of viral entry factors is a prerequisite for the cross-species transmission of
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Large-scale single-cell …

WebCSEA: web-based cell-type-specific enrichment analysis of genes

Y Dai, R Hu, A Liu, KS Cho, AM Manuel… - Nucleic acids …, 2022 - academic.oup.com
Human complex traits and common diseases show tissue-and cell-type-specificity. Recently,
single-cell RNA sequencing (scRNA-seq) technology has successfully depicted cellular …