Nanopore sequencing technology and its application in plant virus diagnostics

K Sun, Y Liu, X Zhou, C Yin, P Zhang, Q Yang… - Frontiers in …, 2022 - frontiersin.org
Plant viruses threaten crop yield and quality; thus, efficient and accurate pathogen
diagnostics are critical for crop disease management and control. Recent advances in …

Nanopore sequencing technology and its applications

P Zheng, C Zhou, Y Ding, B Liu, L Lu, F Zhu… - MedComm, 2023 - Wiley Online Library
Since the development of Sanger sequencing in 1977, sequencing technology has played a
pivotal role in molecular biology research by enabling the interpretation of biological genetic …

Strategies for molecular authentication of herbal products: from experimental design to data analysis

HY Wu, PC Shaw - Chinese Medicine, 2022 - Springer
Molecular herbal authentication has gained worldwide popularity in the past decade. DNA-
based methods, including DNA barcoding and species-specific amplification, have been …

Metabarcoding using nanopore long‐read sequencing for the unbiased characterization of apicomplexan haemoparasites

LG Huggins, V Colella, ND Young… - Molecular Ecology …, 2024 - Wiley Online Library
Apicomplexan haemoparasites generate significant morbidity and mortality in humans and
other animals, particularly in many low‐to‐middle income countries. Malaria caused by …

Application of nanopore sequencing technology in the clinical diagnosis of infectious diseases

LL Zhang, C Zhang, JP Peng - Biomedical and Environmental Sciences, 2022 - Elsevier
Infectious diseases are an enormous public health burden and a growing threat to human
health worldwide. Emerging or classic recurrent pathogens, or pathogens with resistant …

Microbial identification using rRNA operon region: database and tool for metataxonomics with long-read sequence

D Seol, JS Lim, S Sung, YH Lee, M Jeong… - Microbiology …, 2022 - Am Soc Microbiol
Recent development of long-read sequencing platforms has enabled researchers to explore
bacterial community structure through analysis of full-length 16S rRNA gene (∼ 1,500 bp) or …

OMICs, epigenetics, and genome editing techniques for food and nutritional security

YV Gogolev, S Ahmar, BA Akpinar, H Budak… - Plants, 2021 - mdpi.com
The incredible success of crop breeding and agricultural innovation in the last century
greatly contributed to the Green Revolution, which significantly increased yields and …

Marine copepods as a microbiome hotspot: Revealing their interactions and biotechnological applications

J Feng, M Mazzei, S Di Gregorio, L Niccolini, V Vitiello… - Water, 2023 - mdpi.com
Copepods are the most abundant organisms in marine zooplankton and the primary
components of the food chain. They are hotspots for highly adaptable microorganisms …

[HTML][HTML] Deep-sea sediment metagenome from Bay of Bengal reveals distinct microbial diversity and functional significance

J Marimuthu, VR Rangamaran, SHS Subramanian… - Genomics, 2022 - Elsevier
Abstract Bay of Bengal (BoB) has immense significance with respect to ecological diversity
and natural resources. Studies on microbial profiling and their functional significance at …

The application of nanopore targeted sequencing for pathogen diagnosis in bronchoalveolar lavage fluid of patients with pneumonia: a prospective multicenter study

Q Lin, Y Yao, X Li, S Zhang, H Guo, X Ma… - Infectious …, 2024 - Taylor & Francis
Objective To evaluate the value of nanopore targeted sequencing in diagnosing pneumonia
pathogens. Methods This large-scale multicentre prospective study performed in 8 hospitals …