Scaling self-supervised learning for histopathology with masked image modeling

A Filiot, R Ghermi, A Olivier, P Jacob, L Fidon… - medRxiv, 2023 - medrxiv.org
Computational pathology is revolutionizing the field of pathology by integrating advanced
computer vision and machine learning technologies into diagnostic workflows. It offers …

Benchmarking self-supervised learning on diverse pathology datasets

M Kang, H Song, S Park, D Yoo… - Proceedings of the …, 2023 - openaccess.thecvf.com
Computational pathology can lead to saving human lives, but models are annotation hungry
and pathology images are notoriously expensive to annotate. Self-supervised learning has …

Domain-specific optimization and diverse evaluation of self-supervised models for histopathology

J Lai, F Ahmed, S Vijay, T Jaroensri, J Loo… - arXiv preprint arXiv …, 2023 - arxiv.org
Task-specific deep learning models in histopathology offer promising opportunities for
improving diagnosis, clinical research, and precision medicine. However, development of …

Self-supervision closes the gap between weak and strong supervision in histology

O Dehaene, A Camara, O Moindrot… - arXiv preprint arXiv …, 2020 - arxiv.org
One of the biggest challenges for applying machine learning to histopathology is weak
supervision: whole-slide images have billions of pixels yet often only one global label. The …

Teacher-student chain for efficient semi-supervised histology image classification

S Shaw, M Pajak, A Lisowska, SA Tsaftaris… - arXiv preprint arXiv …, 2020 - arxiv.org
Deep learning shows great potential for the domain of digital pathology. An automated
digital pathology system could serve as a second reader, perform initial triage in large …

Benchmarking weakly-supervised deep learning pipelines for whole slide classification in computational pathology

NG Laleh, HS Muti, CML Loeffler, A Echle… - Medical image …, 2022 - Elsevier
Artificial intelligence (AI) can extract visual information from histopathological slides and
yield biological insight and clinical biomarkers. Whole slide images are cut into thousands of …

Self-supervised driven consistency training for annotation efficient histopathology image analysis

CL Srinidhi, SW Kim, FD Chen, AL Martel - Medical image analysis, 2022 - Elsevier
Training a neural network with a large labeled dataset is still a dominant paradigm in
computational histopathology. However, obtaining such exhaustive manual annotations is …

Learning representations with contrastive self-supervised learning for histopathology applications

K Stacke, J Unger, C Lundström, G Eilertsen - arXiv preprint arXiv …, 2021 - arxiv.org
Unsupervised learning has made substantial progress over the last few years, especially by
means of contrastive self-supervised learning. The dominating dataset for benchmarking self …

A general-purpose self-supervised model for computational pathology

RJ Chen, T Ding, MY Lu, DFK Williamson… - arXiv preprint arXiv …, 2023 - arxiv.org
Tissue phenotyping is a fundamental computational pathology (CPath) task in learning
objective characterizations of histopathologic biomarkers in anatomic pathology. However …

Self-supervised vision transformers learn visual concepts in histopathology

RJ Chen, RG Krishnan - arXiv preprint arXiv:2203.00585, 2022 - arxiv.org
Tissue phenotyping is a fundamental task in learning objective characterizations of
histopathologic biomarkers within the tumor-immune microenvironment in cancer pathology …