Integrated genome and transcriptome sequencing of the same cell

SS Dey, L Kester, B Spanjaard, M Bienko… - Nature …, 2015 - nature.com
Single-cell genomics and single-cell transcriptomics have emerged as powerful tools to
study the biology of single cells at a genome-wide scale. However, a major challenge is to …

Optimizing sparse sequencing of single cells for highly multiplex copy number profiling

T Baslan, J Kendall, B Ward, H Cox, A Leotta… - Genome …, 2015 - genome.cshlp.org
Genome-wide analysis at the level of single cells has recently emerged as a powerful tool to
dissect genome heterogeneity in cancer, neurobiology, and development. To be truly …

Single-cell genomics: coming of age

S Linnarsson, SA Teichmann - Genome biology, 2016 - Springer
Single-cell genomics is the study of the individuality of cells using omics approaches.
Although young, the field has now entered its teenage years and is beginning to show clear …

G&T-seq: parallel sequencing of single-cell genomes and transcriptomes

IC Macaulay, W Haerty, P Kumar, YI Li, TX Hu… - Nature …, 2015 - nature.com
The simultaneous sequencing of a single cell's genome and transcriptome offers a powerful
means to dissect genetic variation and its effect on gene expression. Here we describe G&T …

Applications of single-cell DNA sequencing

GD Evrony, AG Hinch, C Luo - Annual review of genomics and …, 2021 - annualreviews.org
Over the past decade, genomic analyses of single cells—the fundamental units of life—have
become possible. Single-cell DNA sequencing has shed light on biological questions that …

Design and analysis of single-cell sequencing experiments

D Grün, A van Oudenaarden - Cell, 2015 - cell.com
Recent advances in single-cell sequencing hold great potential for exploring biological
systems with unprecedented resolution. Sequencing the genome of individual cells can …

Separation and parallel sequencing of the genomes and transcriptomes of single cells using G&T-seq

IC Macaulay, MJ Teng, W Haerty, P Kumar… - Nature protocols, 2016 - nature.com
Parallel sequencing of a single cell's genome and transcriptome provides a powerful tool for
dissecting genetic variation and its relationship with gene expression. Here we present a …

Dissecting genomic diversity, one cell at a time

PC Blainey, SR Quake - Nature methods, 2014 - nature.com
Dissecting genomic diversity, one cell at a time | Nature Methods Skip to main content Thank
you for visiting nature.com. You are using a browser version with limited support for CSS. To …

[HTML][HTML] Single cell analysis of cancer genomes

P Van Loo, T Voet - Current opinion in genetics & development, 2014 - Elsevier
Genomic studies have provided key insights into how cancers develop, evolve, metastasize
and respond to treatment. Cancers result from an interplay between mutation, selection and …

Sequencing thousands of single-cell genomes with combinatorial indexing

SA Vitak, KA Torkenczy, JL Rosenkrantz, AJ Fields… - Nature …, 2017 - nature.com
Single-cell genome sequencing has proven valuable for the detection of somatic variation,
particularly in the context of tumor evolution. Current technologies suffer from high library …