Prioritization of genes for translation: A computational approach

SC da Silva Rosa, A Barzegar Behrooz… - Expert Review of …, 2024 - Taylor & Francis
Introduction Gene identification for genetic diseases is critical for the development of new
diagnostic approaches and personalized treatment options. Prioritization of gene translation …

Computational tools for prioritizing candidate genes: boosting disease gene discovery

Y Moreau, LC Tranchevent - Nature Reviews Genetics, 2012 - nature.com
At different stages of any research project, molecular biologists need to choose—often
somewhat arbitrarily, even after careful statistical data analysis—which genes or proteins to …

GeneTIER: prioritization of candidate disease genes using tissue-specific gene expression profiles

A Antanaviciute, C Daly, LA Crinnion… - …, 2015 - academic.oup.com
Motivation: In attempts to determine the genetic causes of human disease, researchers are
often faced with a large number of candidate genes. Linkage studies can point to a genomic …

Recent approaches to the prioritization of candidate disease genes

NT Doncheva, T Kacprowski… - … : Systems Biology and …, 2012 - Wiley Online Library
Many efforts are still devoted to the discovery of genes involved with specific phenotypes, in
particular, diseases. High‐throughput techniques are thus applied frequently to detect …

Chapter 15: disease gene prioritization

Y Bromberg - PLoS computational biology, 2013 - journals.plos.org
Disease-causing aberrations in the normal function of a gene define that gene as a disease
gene. Proving a causal link between a gene and a disease experimentally is expensive and …

A survey of gene prioritization tools for mendelian and complex human diseases

O Zolotareva, M Kleine - Journal of integrative bioinformatics, 2019 - degruyter.com
Modern high-throughput experiments provide us with numerous potential associations
between genes and diseases. Experimental validation of all the discovered associations, let …

Computational disease gene prioritization: an appraisal

N Gill, S Singh, TC Aseri - Journal of Computational Biology, 2014 - liebertpub.com
Bioinformatics aids in the understanding of the biological processes of living beings and the
genetic architecture of human diseases. The discovery of disease-related genes improves …

Candidate gene prioritization by network analysis of differential expression using machine learning approaches

D Nitsch, JP Gonçalves, F Ojeda, B De Moor… - BMC …, 2010 - Springer
Background Discovering novel disease genes is still challenging for diseases for which no
prior knowledge-such as known disease genes or disease-related pathways-is available …

RETRACTED ARTICLE: Candidate gene prioritization

A Masoudi-Nejad, A Meshkin, B Haji-Eghrari… - Molecular genetics and …, 2012 - Springer
Candidate gene identification is typically labour intensive, involving laboratory experiments
required to corroborate or disprove any hypothesis for a nominated candidate gene being …

Integrative gene selection on gene expression data: providing biological context to traditional approaches

C Perscheid, B Grasnick, M Uflacker - Journal of Integrative …, 2019 - degruyter.com
The advance of high-throughput RNA-Sequencing techniques enables researchers to
analyze the complete gene activity in particular cells. From the insights of such analyses …