Detection and characterization of lung cancer using cell-free DNA fragmentomes

D Mathios, JS Johansen, S Cristiano, JE Medina… - Nature …, 2021 - nature.com
Non-invasive approaches for cell-free DNA (cfDNA) assessment provide an opportunity for
cancer detection and intervention. Here, we use a machine learning model for detecting …

Multidimensional cell-free DNA fragmentomic assay for detection of early-stage lung cancer

S Wang, F Meng, M Li, H Bao, X Chen… - American Journal of …, 2023 - atsjournals.org
Rationale: Cell-free DNA (cfDNA) analysis holds promise for early detection of lung cancer
and benefits patients with higher survival. However, the detection sensitivity of previous …

Machine learning enables detection of early-stage colorectal cancer by whole-genome sequencing of plasma cell-free DNA

N Wan, D Weinberg, TY Liu, K Niehaus, EA Ariazi… - BMC cancer, 2019 - Springer
Background Blood-based methods using cell-free DNA (cfDNA) are under development as
an alternative to existing screening tests. However, early-stage detection of cancer using …

Detecting liver cancer using cell-free DNA fragmentomes

ZH Foda, AV Annapragada, K Boyapati, DC Bruhm… - Cancer discovery, 2023 - AACR
Liver cancer is a major cause of cancer mortality worldwide. Screening individuals at high
risk, including those with cirrhosis and viral hepatitis, provides an avenue for improved …

An ultra-sensitive assay using cell-free DNA fragmentomics for multi-cancer early detection

H Bao, Z Wang, X Ma, W Guo, X Zhang, W Tang… - Molecular cancer, 2022 - Springer
Early detection can benefit cancer patients with more effective treatments and better
prognosis, but existing early screening tests are limited, especially for multi-cancer …

Enhanced detection of circulating tumor DNA by fragment size analysis

F Mouliere, D Chandrananda, AM Piskorz… - Science translational …, 2018 - science.org
Existing methods to improve detection of circulating tumor DNA (ctDNA) have focused on
genomic alterations but have rarely considered the biological properties of plasma cell-free …

Identification of circulating tumor DNA for the early detection of small-cell lung cancer

L Fernandez-Cuesta, S Perdomo, PH Avogbe… - …, 2016 - thelancet.com
Circulating tumor DNA (ctDNA) is emerging as a key potential biomarker for post-diagnosis
surveillance but it may also play a crucial role in the detection of pre-clinical cancer. Small …

Leveraging the fragment length of circulating tumour DNA to improve molecular profiling of solid tumour malignancies with next-generation sequencing: a pathway to …

HR Underhill - Molecular diagnosis & therapy, 2021 - Springer
Circulating cell-free DNA (ccfDNA) has emerged as a promising diagnostic tool in oncology.
Identification of tumour-derived ccfDNA (ie circulating tumour DNA [ctDNA]) provides non …

Genome-wide cell-free DNA fragmentation in patients with cancer

S Cristiano, A Leal, J Phallen, J Fiksel, V Adleff… - Nature, 2019 - nature.com
Cell-free DNA in the blood provides a non-invasive diagnostic avenue for patients with
cancer. However, characteristics of the origins and molecular features of cell-free DNA are …

Integrating genomic features for non-invasive early lung cancer detection

JJ Chabon, EG Hamilton, DM Kurtz, MS Esfahani… - Nature, 2020 - nature.com
Radiologic screening of high-risk adults reduces lung-cancer-related mortality,; however, a
small minority of eligible individuals undergo such screening in the United States,. The …