Multiscale modeling for image analysis of brain tumor studies

S Bauer, C May, D Dionysiou… - IEEE transactions on …, 2011 - ieeexplore.ieee.org
Image-based modeling of tumor growth combines methods from cancer simulation and
medical imaging. In this context, we present a novel approach to adapt a healthy brain atlas …

ORBIT: A multiresolution framework for deformable registration of brain tumor images

EI Zacharaki, D Shen, SK Lee… - IEEE transactions on …, 2008 - ieeexplore.ieee.org
A deformable registration method is proposed for registering a normal brain atlas with
images of brain tumor patients. The registration is facilitated by first simulating the tumor …

Atlas-based segmentation of pathological MR brain images using a model of lesion growth

MB Cuadra, C Pollo, A Bardera… - IEEE transactions on …, 2004 - ieeexplore.ieee.org
We propose a method for brain atlas deformation in the presence of large space-occupying
tumors, based on an a priori model of lesion growth that assumes radial expansion of the …

A robust framework for soft tissue simulations with application to modeling brain tumor mass effect in 3D MR images

C Hogea, G Biros, F Abraham… - Physics in Medicine & …, 2007 - iopscience.iop.org
We present a framework for black-box and flexible simulation of soft tissue deformation for
medical imaging and surgical planning applications. Our main motivation in the present …

Atlas-based segmentation of brain tumor images using a Markov random field-based tumor growth model and non-rigid registration

S Bauer, C Seiler, T Bardyn… - … conference of the …, 2010 - ieeexplore.ieee.org
We propose a new and clinically oriented approach to perform atlas-based segmentation of
brain tumor images. A mesh-free method is used to model tumor-induced soft tissue …

Deformable registration of brain tumor images via a statistical model of tumor-induced deformation

A Mohamed, EI Zacharaki, D Shen, C Davatzikos - Medical image analysis, 2006 - Elsevier
An approach to the deformable registration of three-dimensional brain tumor images to a
normal brain atlas is presented. The approach involves the integration of three components …

Nonlinear elastic registration of brain images with tumor pathology using a biomechanical model [MRI]

SK Kyriacou, C Davatzikos, SJ Zinreich… - IEEE transactions on …, 1999 - ieeexplore.ieee.org
A biomechanical model of the brain is presented, using a finite-element formulation.
Emphasis is given to the modeling of the soft-tissue deformations induced by the growth of …

Dense deformation field estimation for atlas-based segmentation of pathological MR brain images

MB Cuadra, M De Craene, V Duay, B Macq… - Computer methods and …, 2006 - Elsevier
Atlas registration is a recognized paradigm for the automatic segmentation of normal MR
brain images. Unfortunately, atlas-based segmentation has been of limited use in presence …

Segmentation of brain tumor images based on atlas-registration combined with a Markov-Random-Field lesion growth model

S Bauer, LP Nolte, M Reyes - 2011 IEEE International …, 2011 - ieeexplore.ieee.org
We present an automatic method to segment brain tissues from volumetric MRI brain tumor
images. The method is based on non-rigid registration of an average atlas in combination …

Atlas-based segmentation of pathological brains using a model of tumor growth

MB Cuadra, J Gomez, P Hagmann, C Pollo… - … Image Computing and …, 2002 - Springer
We propose a method for brain atlas deformation in presence of large space-occupying
tumors or lesions, based on an a priori model of lesion growth that assumes radial …