Structure-based virtual screening is an important tool in early stage drug discovery that scores the interactions between a target protein and candidate ligands. As virtual libraries …
Virtual screening—predicting which compounds within a specified compound library bind to a target molecule, typically a protein—is a fundamental task in the field of drug discovery …
Introduction The discovery of a new drug is a costly and lengthy endeavour. The computational prediction of which small molecules can bind to a protein target can …
H Li, KH Sze, G Lu, PJ Ballester - Wiley Interdisciplinary …, 2021 - Wiley Online Library
Molecular docking predicts whether and how small molecules bind to a macromolecular target using a suitable 3D structure. Scoring functions for structure‐based virtual screening …
F Berenger, A Kumar, KYJ Zhang… - Journal of Chemical …, 2021 - ACS Publications
In structure-based virtual screening (SBVS), a binding site on a protein structure is used to search for ligands with favorable nonbonded interactions. Because it is computationally …
H Zhang, KM Saravanan, JZH Zhang - Molecules, 2023 - mdpi.com
The core of large-scale drug virtual screening is to select the binders accurately and efficiently with high affinity from large libraries of small molecules in which non-binders are …
C Shen, X Zhang, Y Deng, J Gao, D Wang… - Journal of Medicinal …, 2022 - ACS Publications
The past few years have witnessed enormous progress toward applying machine learning approaches to the development of protein–ligand scoring functions. However, the robust …
H Jiang, J Wang, W Cong, Y Huang… - Journal of chemical …, 2022 - ACS Publications
Modern day drug discovery is extremely expensive and time consuming. Although computational approaches help accelerate and decrease the cost of drug discovery, existing …
J Scantlebury, N Brown, F Von Delft… - Journal of chemical …, 2020 - ACS Publications
Current deep learning methods for structure-based virtual screening take the structures of both the protein and the ligand as input but make little or no use of the protein structure …