[HTML][HTML] InterVar: clinical interpretation of genetic variants by the 2015 ACMG-AMP guidelines

Q Li, K Wang - The American Journal of Human Genetics, 2017 - cell.com
In 2015, the American College of Medical Genetics and Genomics (ACMG) and the
Association for Molecular Pathology (AMP) published updated standards and guidelines for …

ClinGen variant curation expert panel experiences and standardized processes for disease and gene‐level specification of the ACMG/AMP guidelines for sequence …

EA Rivera‐Muñoz, LV Milko, SM Harrison… - Human …, 2018 - Wiley Online Library
Genome‐scale sequencing creates vast amounts of genomic data, increasing the challenge
of clinical sequence variant interpretation. The demand for high‐quality interpretation …

[HTML][HTML] Evaluation of in silico algorithms for use with ACMG/AMP clinical variant interpretation guidelines

R Ghosh, N Oak, SE Plon - Genome biology, 2017 - Springer
Abstract Background The American College of Medical Genetics and American College of
Pathologists (ACMG/AMP) variant classification guidelines for clinical reporting are widely …

VariantValidator: Accurate validation, mapping, and formatting of sequence variation descriptions

PJ Freeman, RK Hart, LJ Gretton, AJ Brookes… - Human …, 2018 - Wiley Online Library
Abstract The Human Genome Variation Society (HGVS) variant nomenclature is widely used
to describe sequence variants in scientific publications, clinical reports, and databases …

Clinical interpretation of sequence variants

J Zhang, Y Yao, H He, J Shen - Current protocols in human …, 2020 - Wiley Online Library
Clinical interpretation of DNA sequence variants is a critical step in reporting clinical genetic
testing results. Application of next‐generation sequencing technology in molecular genetic …

[HTML][HTML] Recommendations for application of the functional evidence PS3/BS3 criterion using the ACMG/AMP sequence variant interpretation framework

SE Brnich, AN Abou Tayoun, FJ Couch, GR Cutting… - Genome medicine, 2020 - Springer
Abstract Background The American College of Medical Genetics and Genomics
(ACMG)/Association for Molecular Pathology (AMP) clinical variant interpretation guidelines …

[HTML][HTML] Clinical laboratories collaborate to resolve differences in variant interpretations submitted to ClinVar

SM Harrison, JS Dolinsky, AE Knight Johnson… - Genetics in …, 2017 - nature.com
Purpose: Data sharing through ClinVar offers a unique opportunity to identify interpretation
differences between laboratories. As part of a ClinGen initiative, four clinical laboratories …

ClinVar: public archive of interpretations of clinically relevant variants

MJ Landrum, JM Lee, M Benson, G Brown… - Nucleic acids …, 2016 - academic.oup.com
Abstract ClinVar (https://www. ncbi. nlm. nih. gov/clinvar/) at the National Center for
Biotechnology Information (NCBI) is a freely available archive for interpretations of clinical …

ClinVar: improving access to variant interpretations and supporting evidence

MJ Landrum, JM Lee, M Benson, GR Brown… - Nucleic acids …, 2018 - academic.oup.com
Abstract ClinVar (https://www. ncbi. nlm. nih. gov/clinvar/) is a freely available, public archive
of human genetic variants and interpretations of their significance to disease, maintained at …

[HTML][HTML] The challenge of comprehensive and consistent sequence variant interpretation between clinical laboratories

MG Pepin, ML Murray, S Bailey, D Leistritz-Kessler… - Genetics in …, 2016 - Elsevier
Purpose Genetic testing has shifted from academic laboratories with expertise in specific
genes to commercial laboratories that offer tests of a diverse array of genes. The purpose of …