High-speed fluorescence image–enabled cell sorting

D Schraivogel, TM Kuhn, B Rauscher… - Science, 2022 - science.org
Fast and selective isolation of single cells with unique spatial and morphological traits
remains a technical challenge. Here, we address this by establishing high-speed image …

A practical guide to intelligent image-activated cell sorting

A Isozaki, H Mikami, K Hiramatsu, S Sakuma, Y Kasai… - Nature protocols, 2019 - nature.com
Intelligent image-activated cell sorting (iIACS) is a machine-intelligence technology that
performs real-time intelligent image-based sorting of single cells with high throughput. iIACS …

Versatile phenotype-activated cell sorting

J Lee, Z Liu, PH Suzuki, JF Ahrens, S Lai, X Lu… - Science …, 2020 - science.org
Unraveling the genetic and epigenetic determinants of phenotypes is critical for
understanding and re-engineering biology and would benefit from improved methods to …

Machine learning based real‐time image‐guided cell sorting and classification

Y Gu, AC Zhang, Y Han, J Li, C Chen, YH Lo - Cytometry Part A, 2019 - Wiley Online Library
Cell classification based on phenotypical, spatial, and genetic information greatly advances
our understanding of the physiology and pathology of biological systems. Technologies …

High-throughput genome-wide phenotypic screening via immunomagnetic cell sorting

B Mair, PM Aldridge, RS Atwal, D Philpott… - Nature Biomedical …, 2019 - nature.com
Genome-scale functional genetic screens are used to identify key genetic regulators of a
phenotype of interest. However, the identification of genetic modifications that lead to a …

High‐throughput, microscope‐based sorting to dissect cellular heterogeneity

N Hasle, A Cooke, S Srivatsan, H Huang… - Molecular Systems …, 2020 - embopress.org
Microscopy is a powerful tool for characterizing complex cellular phenotypes, but linking
these phenotypes to genotype or RNA expression at scale remains challenging. Here, we …

Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells

EP Mimitou, A Cheng, A Montalbano, S Hao… - Nature …, 2019 - nature.com
Multimodal single-cell assays provide high-resolution snapshots of complex cell
populations, but are mostly limited to transcriptome plus an additional modality. Here, we …

Microscopy-based high-content screening

M Boutros, F Heigwer, C Laufer - Cell, 2015 - cell.com
Image-based screening is used to measure a variety of phenotypes in cells and whole
organisms. Combined with perturbations such as RNA interference, small molecules, and …

Pooled genetic perturbation screens with image-based phenotypes

D Feldman, L Funk, A Le, RJ Carlson, MD Leiken… - Nature protocols, 2022 - nature.com
Discovery of the genetic components underpinning fundamental and disease-related
processes is being rapidly accelerated by combining efficient, programmable genetic …

Pooled Genome-Scale CRISPR Screens in Single Cells

D Schraivogel, LM Steinmetz… - Annual Review of …, 2023 - annualreviews.org
Assigning functions to genes and learning how to control their expression are part of the
foundation of cell biology and therapeutic development. An efficient and unbiased method to …