Novel targets for engineering Physostegia chlorotic mottle and tomato brown rugose fruit virus-resistant tomatoes: in silico prediction of tomato microRNA targets

YZA Gaafar, H Ziebell - PeerJ, 2020 - peerj.com
Background Physostegia chlorotic mottle virus (PhCMoV; genus: Alphanucleorhabdovirus,
family: Rhabdoviridae) and tomato brown rugose fruit virus (ToBRFV; genus: Tobamovirus …

In silico identification and validation of microRNAs from the genome of Solanum lycopersicum targeting Groundnut bud necrosis orthotospovirus

M Nivedha, S Harish, K Angappan… - … and Molecular Plant …, 2023 - Elsevier
Tomato, an extensively cultivated edible crop is prone to many viral pathogens. Among
them, bud necrosis incited by Groundnut bud necrosis orthotospovirus (GBNV) causes huge …

In silico apple genome-encoded microRNA target binding sites targeting apple chlorotic leaf spot virus

MA Ashraf, N Murtaza, JK Brown, N Yu - Horticulturae, 2023 - mdpi.com
Apple chlorotic leaf spot virus (ACLSV)(genus, Trichovirus; family, Betaflexiviridae) is a
widespread, deleterious, and the most damaging pathogen of pome and fruit trees including …

Prediction and experimental confirmation of banana bract mosaic virus encoding miRNAs and their targets

R Sankaranarayanan, SN Palani, A Kumar… - ExRNA, 2020 - Springer
Background Potyviridae is the largest plant infecting family under the monophyletic group
Riboviria, infects many of the food, fodder and ornamental crops. Due to the higher mutation …

High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L.) microRNAs in Response to Cucumber Green Mottle Mosaic Virus …

HW Liu, LX Luo, CQ Liang, N Jiang, PF Liu, JQ Li - PloS one, 2015 - journals.plos.org
Seedlings of Cucumis sativus L.(cv.'Zhongnong 16') were artificially inoculated with
Cucumber green mottle mosaic virus (CGMMV) at the three-true-leaf stage. Leaf and flower …

In silico prediction of miRNAs targeting ToLCV and their regulation in susceptible and resistant tomato plants

N Tousi, O Eini, R Ahmadvand, A Carra… - Australasian Plant …, 2017 - Springer
Tomato leaf curl disease is one of the main constraints in tomato production worldwide. It is
induced by viruses including Tomato leaf curl virus (ToLCV). Plant viruses can both induce …

Analysis of the miRNA expression profile involved in the tomato spotted wilt orthotospovirus–pepper interaction

H Tao, Z Jia, X Gao, M Gui, Y Li, Y Liu - Virus Research, 2022 - Elsevier
MicroRNAs (miRNAs) are a class of about 22 nucleotide endogenous non-coding small
RNAs that play important roles in plant development and defense responses to biotic and …

A novel computational approach to the silencing of Sugarcane Bacilliform Guadeloupe A Virus determines potential host-derived MicroRNAs in sugarcane …

F Ashraf, MA Ashraf, X Hu, S Zhang - PeerJ, 2020 - peerj.com
Sugarcane Bacilliform Guadeloupe A Virus (SCBGAV, genus Badnavirus, family
Caulimoviridae) is an emerging, deleterious pathogen of sugarcane which presents a …

In silico analysis reveals that several tomato microRNA/microRNA∗ sequences exhibit propensity to bind to tomato leaf curl virus (ToLCV) associated genomes and …

AR Naqvi, NR Choudhury, SK Mukherjee… - Plant physiology and …, 2011 - Elsevier
Tomato leaf curl virus (ToLCV) is a member of family geminiviridae that constitute rapidly
emerging group of phytopathogens posing threat to a large number of vegetable crops …

Candidate miRNAs from Oryza sativa for Silencing the Rice Tungro Viruses

NA Mohamed, NMFNC Ngah, A Abas, N Talip… - Agriculture, 2023 - mdpi.com
Rice tungro disease (RTD), caused by Rice tungro bacilliform virus (RTBV) and Rice tungro
spherical virus (RTSV) is one of the most prominent viral diseases in Asian countries. This …